| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2417 |
|---|
| Symbol | |
|---|
| ID | 3676530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2638700 |
|---|
| End bp | 2639452 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637713981 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_319023 |
|---|
| Protein GI | 75676602 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.034588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0382931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA TTCCGCCGCT GTCTCGTCAG GCCCTTTCAA ACCTCGAACT CTTTCGAGGC
TTGCCGGCGA CAGCGCTGGA TGAGGTTCTT GCATCGGCTG CGCCGCGTTC CTTTGCCCGC
GATTGCCGTG TGTTCAATCA GGGCGAAACA CGCGTGCGCG CTCATGTCCT TGTCGATGGC
TGGATCAGGA TTTCCCAATC CGGCAGCGAC GGCGGACAGG TGGTGCTGCG CTTCATCGGA
CCCGGTGATA CTTTCGGTGC GGTCTCGCTG TTCACGGATC GGCGCTATCC CGCCGATGCC
GATACCTTGA CGGACGCGAC CGAGGTGAGC TGGAGCGACA AAGCCTTGCT CGATCTGATG
AACAGTCATC CCCAGATCGC CATCAACGCC ATCCGGATCG TGGGCCAGCG GCTTCAGGAA
GCCCAGCACA GGGTTCGCGA GCTTGCCACC CAGAGCGCGG AGCGGCGCGT GGCTCATGCG
CTGTTACGGC TGACTCGTCA GGTCGGCACC GCGACCGCTC GGGGTATCGT CATCCGCTTT
CCGCTTCGCC GGAAAGACAT CGCCGATATC GCCGGAACCA CCCTTTACTC CGCGAGCCGC
ATTCTGAGCG CCTGGGAAAG AGCCGGCTGG CTCAAGACGC TCGACCGGCG CATTGCTGTC
GAAAGTCTCT CGGAACTGGT GCGCATCGCG GAGGACGAGA GCGAAACGGG GAGAGGAGCG
ATCGCCGCTT CGGCCGACCG CCATGCCGGA TAA
|
|---|
| Protein sequence | MSKIPPLSRQ ALSNLELFRG LPATALDEVL ASAAPRSFAR DCRVFNQGET RVRAHVLVDG
WIRISQSGSD GGQVVLRFIG PGDTFGAVSL FTDRRYPADA DTLTDATEVS WSDKALLDLM
NSHPQIAINA IRIVGQRLQE AQHRVRELAT QSAERRVAHA LLRLTRQVGT ATARGIVIRF
PLRRKDIADI AGTTLYSASR ILSAWERAGW LKTLDRRIAV ESLSELVRIA EDESETGRGA
IAASADRHAG
|
|---|
| |