More than 300 homologs were found in PanDaTox collection
for query gene Tter_2020 on replicon NC_013526
Organism: Thermobaculum terrenum ATCC BAA-798



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  100 
 
 
239 aa  474  1e-133  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  40.65 
 
 
231 aa  155  5.0000000000000005e-37  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  37.79 
 
 
236 aa  153  2e-36  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  38.97 
 
 
240 aa  146  2.0000000000000003e-34  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  38.46 
 
 
236 aa  146  4.0000000000000006e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  38.57 
 
 
239 aa  145  7.0000000000000006e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  36.04 
 
 
231 aa  142  3e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  36.84 
 
 
236 aa  142  4e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  36.92 
 
 
231 aa  141  7e-33  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  36.92 
 
 
231 aa  141  7e-33  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  35.59 
 
 
227 aa  140  1.9999999999999998e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  36.24 
 
 
234 aa  139  3.9999999999999997e-32  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  37.91 
 
 
233 aa  139  4.999999999999999e-32  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  37.74 
 
 
233 aa  138  7.999999999999999e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  37.74 
 
 
233 aa  138  7.999999999999999e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  37.84 
 
 
225 aa  137  1e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  37.18 
 
 
249 aa  136  3.0000000000000003e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  34.88 
 
 
231 aa  135  5e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  35.27 
 
 
232 aa  135  6.0000000000000005e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  36.87 
 
 
233 aa  135  6.0000000000000005e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  34.78 
 
 
232 aa  134  9.999999999999999e-31  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  35.14 
 
 
232 aa  130  2.0000000000000002e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  34.21 
 
 
261 aa  127  1.0000000000000001e-28  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  35.61 
 
 
257 aa  121  9e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  32.08 
 
 
219 aa  119  3e-26  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  34.68 
 
 
250 aa  117  1.9999999999999998e-25  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  31.02 
 
 
226 aa  117  1.9999999999999998e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_009507  Swit_5204  CRP/FNR family transcriptional regulator  35.55 
 
 
261 aa  115  5e-25  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.26828 
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  35.05 
 
 
257 aa  115  6e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  33.33 
 
 
243 aa  114  1.0000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  33.94 
 
 
226 aa  114  1.0000000000000001e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  31.19 
 
 
231 aa  113  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011831  Cagg_2668  transcriptional regulator, Crp/Fnr family  33.81 
 
 
225 aa  112  4.0000000000000004e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0967754  hitchhiker  0.000000348595 
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  35.92 
 
 
235 aa  112  4.0000000000000004e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0644  transcriptional regulator, Crp/Fnr family  30.96 
 
 
243 aa  112  6e-24  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000386152  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  27.83 
 
 
243 aa  112  7.000000000000001e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008340  Mlg_1070  Crp/FNR family transcriptional regulator  34.08 
 
 
235 aa  110  2.0000000000000002e-23  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.105875  normal 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  32.26 
 
 
224 aa  108  5e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  32.26 
 
 
226 aa  108  8.000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  31.7 
 
 
241 aa  107  2e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  29.95 
 
 
239 aa  107  2e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  32.14 
 
 
240 aa  107  2e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  32.58 
 
 
229 aa  107  2e-22  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  28.7 
 
 
225 aa  106  3e-22  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  30.14 
 
 
225 aa  105  6e-22  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  31.22 
 
 
229 aa  104  1e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  34.01 
 
 
222 aa  103  2e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  31.66 
 
 
223 aa  103  2e-21  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_013172  Bfae_24470  cAMP-binding protein  31.62 
 
 
261 aa  103  2e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  29.11 
 
 
230 aa  103  2e-21  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  28.7 
 
 
226 aa  103  3e-21  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  34.52 
 
 
222 aa  103  3e-21  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  31.39 
 
 
229 aa  103  3e-21  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  30.49 
 
 
252 aa  102  4e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  30.29 
 
 
222 aa  102  4e-21  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  34.36 
 
 
235 aa  102  5e-21  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  33.33 
 
 
228 aa  102  5e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_010730  SYO3AOP1_0394  transcriptional regulator, Crp/Fnr family  32.31 
 
 
237 aa  101  8e-21  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  29.6 
 
 
227 aa  101  1e-20  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  35.02 
 
 
222 aa  100  2e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  33.02 
 
 
229 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  32.3 
 
 
236 aa  100  3e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  30.73 
 
 
225 aa  100  3e-20  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  29.15 
 
 
227 aa  99.4  5e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  31.77 
 
 
352 aa  99  6e-20  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  31.13 
 
 
225 aa  99  6e-20  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  31.82 
 
 
224 aa  97.8  1e-19  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  28.37 
 
 
232 aa  97.8  1e-19  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  29.68 
 
 
227 aa  97.4  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  28.38 
 
 
230 aa  96.7  3e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  32.69 
 
 
229 aa  96.3  3e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  31.37 
 
 
226 aa  96.7  3e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  28.72 
 
 
247 aa  96.3  4e-19  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  29.68 
 
 
229 aa  96.3  4e-19  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  30.22 
 
 
228 aa  96.3  4e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  30.66 
 
 
220 aa  95.5  6e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  32.83 
 
 
228 aa  95.5  6e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  31.19 
 
 
227 aa  95.5  7e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  31.79 
 
 
224 aa  94.7  1e-18  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  28.44 
 
 
228 aa  94.7  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.66 
 
 
226 aa  93.6  2e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.95 
 
 
228 aa  93.6  3e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  30.37 
 
 
231 aa  93.2  3e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  31.66 
 
 
234 aa  93.2  3e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  29.22 
 
 
224 aa  93.2  3e-18  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  32.84 
 
 
234 aa  93.2  4e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  25.37 
 
 
234 aa  92.8  5e-18  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  28.51 
 
 
251 aa  92  7e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  33.18 
 
 
230 aa  92  8e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.9 
 
 
224 aa  91.3  1e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1939  transcriptional regulator, Crp/Fnr family  29.2 
 
 
235 aa  91.3  1e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  30.84 
 
 
227 aa  91.3  1e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.82 
 
 
236 aa  91.3  1e-17  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008687  Pden_3468  CRP/FNR family transcriptional regulator  32.11 
 
 
236 aa  90.9  2e-17  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  29 
 
 
225 aa  90.1  2e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.82 
 
 
236 aa  90.1  3e-17  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_011831  Cagg_2027  transcriptional regulator, Crp/Fnr family  29.19 
 
 
226 aa  90.1  3e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  26.05 
 
 
267 aa  90.1  3e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  31.38 
 
 
236 aa  89  6e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  30.05 
 
 
227 aa  89  7e-17  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>