Gene RPD_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3066 
Symbol 
ID4023569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3415841 
End bp3416563 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID637963265 
Productcyclic nucleotide-binding 
Protein accessionYP_570193 
Protein GI91977534 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTA CAGGCTCGAC TATGGACCAG GGTGCCCTAC GCGCGTCCGT CGCACGCAGC 
GCGTTGTTTT CGCAATTGTC GGAAACCGAG ATTGCATTGC TGTTCAACGC CGCGATGCTT
CGGCGCATTC AACAGGGACA GGTTCTGTTT CATCAAGGCG ATCCGCCGAA CTACCTGTTT
CAGATCGTCG GCGGATTACT TCGGATCACC CAGATCAATT CCGACGGCGA GCAGATCACC
TTGCGGATCG CGCGGCCGGG TGATCTGTGT TGCGTGGCGG CGCTTCGGCG TCCCGCCTAT
CCCGCGACCG CCATTGCGAT CAAGGATGCG ACCGTGCTGG TCTGGCGCGC GTGCACGTTC
CTGGATCTGG CGAGGCGACA TCCCGGGATA GCCGACAACG TGTTGTCCAT CGTCGGAGAT
CGCGCGCACG AGATGCTGAA TCGGGCGACC GAGCTGACCG GCAAGAGCAT CGAGCAGCGG
ATCGCAGCTT GCCTGCTGCG CCTGTCTGCG CAGGCCGGCA CGGAATCGGC AGAAGGCATT
CACATCGAAT TCCCGATCAC CCGCTTCGAC CTCGCCTCGA TGGCAGGTCT CACCTACTTC
ACCGTGAGCC GCACGCTGAG CGCGTGGCAA AAGCAGGGGC TGGTGAAGAC CGGTCGCCAC
CGCCTCACGA TCCTGAAGGT CGCCCACATC GTCGGAATCG CCGAGCCGCG GGTCGGTCGC
TGA
 
Protein sequence
MNVTGSTMDQ GALRASVARS ALFSQLSETE IALLFNAAML RRIQQGQVLF HQGDPPNYLF 
QIVGGLLRIT QINSDGEQIT LRIARPGDLC CVAALRRPAY PATAIAIKDA TVLVWRACTF
LDLARRHPGI ADNVLSIVGD RAHEMLNRAT ELTGKSIEQR IAACLLRLSA QAGTESAEGI
HIEFPITRFD LASMAGLTYF TVSRTLSAWQ KQGLVKTGRH RLTILKVAHI VGIAEPRVGR