Gene Pnap_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3212 
Symbol 
ID4688256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3413578 
End bp3414267 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID639836225 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_983431 
Protein GI121606102 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0543887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA CCATGGTTTC CAGGCTCGAA CTGATTCGAC GCGTGCCCCT TTTTTCAATG 
TTGACCGCCA GCCAGGCGGC TTCGGTAGCC GATGCCGTGG TCAAGCGTCG TTATAAGCGG
GGTGAAACCA TCGTCGAGCA GGGCAAGAGA TCCAATGCCC TGACCATTCT TCTGACCGGC
CGTGCCCGCG TCGTCAGCAC CGATGTGCGA GGGCGCGAGG TGATTCTTGC AACCATGCAT
TCGGGTGACT ACGTGGGCGA GATGAGCCTG ATCGACCAGG CGCCCCATTC AGCCTCGGTT
CTGGCGGAGG TGCAGACGGA TGTGTTGATT CTGGGCCAGC CGGAGTTTGC GCGCTGCCTG
CCCGACATCG ACTCCATGGC TTATGCGGTG CTCAAGGGAC TGGTGCAGCG CCTGCGCCAG
GCAGATCGCA AAATCGAGTC CTTGGCCCTG ATGGATGTCT ATGGCCGGGT GGCCGGGGTG
CTGCTGGAGT TCGCCGGAGA AAGTATGCGG TGCGCCGCAG GCAATGCCGT GATCCCTGGC
AAGGTCTCGC GCCAGGACAT GGCGAAAATG GTCGGCGCCT CGCGCGAGAT GGTCAGCCGG
GTCATGAAGG ACCTTGAAGA GCGCGGTTTC ATCGAAACGC AGGGCGACGG CTCTTTGCTG
GTGACGCATC ACCTGCATTC GCTGGGTTGA
 
Protein sequence
MTPTMVSRLE LIRRVPLFSM LTASQAASVA DAVVKRRYKR GETIVEQGKR SNALTILLTG 
RARVVSTDVR GREVILATMH SGDYVGEMSL IDQAPHSASV LAEVQTDVLI LGQPEFARCL
PDIDSMAYAV LKGLVQRLRQ ADRKIESLAL MDVYGRVAGV LLEFAGESMR CAAGNAVIPG
KVSRQDMAKM VGASREMVSR VMKDLEERGF IETQGDGSLL VTHHLHSLG