Gene Plav_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1010 
Symbol 
ID5456452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1103552 
End bp1104325 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID640876581 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_001412290 
Protein GI154251466 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCGA TTTGCGCTGA AGCAATTGCC GGCGAATTCG TCTCGGCGGT TCACACGGGA 
AGAGATGAAA AGAAGATGGA CACAGCCAGC CGCGTCGGGA TCATCCGCGC CGTCCCCCTT
TTCGACGGGC TGGACAGGGA CGCCCTCGCC ACCGTGGCGG AGGCGGCGCG CGAACAGACT
GTCGCGAAAG GAGAAAACCT CTTCGAGCAG GGCGACGAGG CCACGCATTG TTATGTGCTG
GGCTGGGGGC ACATCAGGCT CGACCAGGTC ACGCCCGACG GACAGAACAT CGTGTTGCGG
CATATGGGCG CGGGCGACAT GATCGGCACT GTCGCCGTGC TCCGCCGCAT GCCCTTTCCC
GCAACGCCGG TGGCGCTGGA AGACAGCCTC GCGCTGAGCT GGAGCGCCCT GCGCTTCGGC
GAATTGATGG ACCTTCACCC TGTCATCGCG CGCAACGCGA TCGGCGTTGT CGGCGGACGG
ATCGAGGAGT TGCAGCGCCG TCTGCAGGAG GTCGCCACTC AGCGCGTCGA ACAGCGGATC
GCGGCCACCC TTCTGCGGCT GGCAAACCAG ACAGGGCGTC GCATTGAGGA CGGCATCGAA
ATCCCTTTTC CGCTGTCCCG TCAGGACCTG GCCGAAATGA CGGCGACGAC GCTGCACACG
GTCAGCCGCA CACTGTCGGC CTGGGACCAT GAAGGCGTGA TCGAGTCGCG CCGGTCGAGC
CATCTCGTCA TCCGCCATCC CCATCGGCTC GTGGAAATCG CGGAACAGAA TTAA
 
Protein sequence
MAPICAEAIA GEFVSAVHTG RDEKKMDTAS RVGIIRAVPL FDGLDRDALA TVAEAAREQT 
VAKGENLFEQ GDEATHCYVL GWGHIRLDQV TPDGQNIVLR HMGAGDMIGT VAVLRRMPFP
ATPVALEDSL ALSWSALRFG ELMDLHPVIA RNAIGVVGGR IEELQRRLQE VATQRVEQRI
AATLLRLANQ TGRRIEDGIE IPFPLSRQDL AEMTATTLHT VSRTLSAWDH EGVIESRRSS
HLVIRHPHRL VEIAEQN