Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1169 |
Symbol | |
ID | 4080875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1203705 |
End bp | 1204388 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009530 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_616218 |
Protein GI | 103486657 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0303416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0506186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCACG CAAGACTTGC CGAACTGCAG AGCCCCGACA GCATCTTTTC CGGCCTTTCG GTCGAGGATT GGGCCGAAAT CACCCGCCGC GCGGTTCAGG TCAATTTCGC CAAGGGCAAG GAATTGCTCG TCCAGGGCGA TCCGGGCGAC ATGATGCTGA TCCTGACCGA GGGGACCGCG CGCGTGTCGA TGCTGACGGC CGGCGGGCGC GAAATCGTCC TCGCTTATGC CGAACCCGGC GCGGTGCTGG GCGAAATCGC GCTGCTCGAC GGAGGCGAGC GCACCGCATC GGTGACGGCG ACCAGCGCCG GCAGCGCGCT GCAACTCGGC CGCAACGCGC TCCGCGACTT TGCCGCGAGC CATCCCGACT TCGCCTGGTC GTTGATGCAG CAGCTCGCGC GTCGGCTGCG TACCGCCGAC CAGACCATCG AAAGCGACCG CGCCTACGCC TCCGGCCCGC GCCTCGCGCG CTATCTGAAA CGCTTGATCC GCAAGGATGT CGGCGTCGCA CAGCGCGTCG AACTCAGCCA GACCGAACTC GGCAATTTCG CCGGAATGAG CCGCGAACAT ATCAACCGCC AGCTCAAAAG CTGGGAAGAA TCGGGGATCA TCGCGCTCGA ACAGGGCCGC GTGCGTGTGC TGGAACCAGA GATACTCGAA GACATAAGCG AAAGCGAAGG ATGA
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Protein sequence | MDHARLAELQ SPDSIFSGLS VEDWAEITRR AVQVNFAKGK ELLVQGDPGD MMLILTEGTA RVSMLTAGGR EIVLAYAEPG AVLGEIALLD GGERTASVTA TSAGSALQLG RNALRDFAAS HPDFAWSLMQ QLARRLRTAD QTIESDRAYA SGPRLARYLK RLIRKDVGVA QRVELSQTEL GNFAGMSREH INRQLKSWEE SGIIALEQGR VRVLEPEILE DISESEG
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