More than 300 homologs were found in PanDaTox collection
for query gene Cagg_2027 on replicon NC_011831
Organism: Chloroflexus aggregans DSM 9485



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011831  Cagg_2027  transcriptional regulator, Crp/Fnr family  100 
 
 
226 aa  464  9.999999999999999e-131  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  47.27 
 
 
227 aa  187  1e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  45.45 
 
 
228 aa  187  1e-46  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_011831  Cagg_2668  transcriptional regulator, Crp/Fnr family  46.6 
 
 
225 aa  184  9e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0967754  hitchhiker  0.000000348595 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  29.28 
 
 
239 aa  119  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  28.37 
 
 
236 aa  119  3e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  27.44 
 
 
236 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  28.37 
 
 
236 aa  117  9.999999999999999e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  28.57 
 
 
240 aa  115  6e-25  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  30.8 
 
 
235 aa  114  1.0000000000000001e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  27.36 
 
 
233 aa  112  6e-24  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  27.78 
 
 
231 aa  108  1e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  27.78 
 
 
231 aa  108  1e-22  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  27.96 
 
 
229 aa  105  7e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  28.84 
 
 
229 aa  105  8e-22  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  30.7 
 
 
229 aa  103  2e-21  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  32.32 
 
 
257 aa  102  4e-21  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  28.78 
 
 
231 aa  102  4e-21  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008340  Mlg_1070  Crp/FNR family transcriptional regulator  29.73 
 
 
235 aa  101  8e-21  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.105875  normal 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  27.6 
 
 
241 aa  101  1e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  27.32 
 
 
232 aa  100  2e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  26.85 
 
 
231 aa  100  2e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  26.21 
 
 
231 aa  98.2  9e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  26.17 
 
 
234 aa  97.4  1e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  26.46 
 
 
352 aa  96.7  2e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  25.23 
 
 
230 aa  96.3  3e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.75 
 
 
229 aa  95.1  7e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  26.11 
 
 
250 aa  92.8  4e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  25.66 
 
 
243 aa  92  7e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  26.4 
 
 
232 aa  90.9  1e-17  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  24.86 
 
 
233 aa  89.7  3e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  23.92 
 
 
352 aa  89.4  4e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  24.86 
 
 
233 aa  88.6  7e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  24.86 
 
 
233 aa  88.6  7e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  25.34 
 
 
240 aa  88.6  7e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  26.34 
 
 
221 aa  88.6  7e-17  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  25 
 
 
249 aa  88.2  1e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  27.98 
 
 
310 aa  86.7  2e-16  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  26.48 
 
 
238 aa  86.3  3e-16  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  26.07 
 
 
252 aa  86.3  3e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.12 
 
 
243 aa  85.5  6e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  30.69 
 
 
234 aa  85.1  8e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  25.38 
 
 
232 aa  85.1  9e-16  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0657  cyclic nucleotide-binding protein  26.05 
 
 
246 aa  84.7  0.000000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.418671  normal  0.417958 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.23 
 
 
225 aa  83.2  0.000000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  25.58 
 
 
225 aa  83.2  0.000000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.23 
 
 
225 aa  83.2  0.000000000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  22.83 
 
 
227 aa  83.2  0.000000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  26.46 
 
 
254 aa  82.8  0.000000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  26.02 
 
 
230 aa  82.8  0.000000000000004  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25 
 
 
247 aa  82  0.000000000000006  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  23.53 
 
 
224 aa  82  0.000000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  81.6  0.000000000000008  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  81.6  0.000000000000008  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  25.93 
 
 
250 aa  81.6  0.00000000000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  80.9  0.00000000000001  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  21.08 
 
 
231 aa  81.3  0.00000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  26.4 
 
 
227 aa  80.9  0.00000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  22.37 
 
 
227 aa  80.9  0.00000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  29.19 
 
 
239 aa  80.9  0.00000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_009507  Swit_5204  CRP/FNR family transcriptional regulator  25.77 
 
 
261 aa  80.1  0.00000000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.26828 
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  23.81 
 
 
355 aa  79.7  0.00000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  26.46 
 
 
222 aa  79.7  0.00000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  24.88 
 
 
234 aa  79.3  0.00000000000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  23.87 
 
 
242 aa  79.7  0.00000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  22.58 
 
 
226 aa  79.3  0.00000000000005  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  29.08 
 
 
228 aa  79  0.00000000000005  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  25.89 
 
 
262 aa  79  0.00000000000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  23.72 
 
 
228 aa  79  0.00000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  22.87 
 
 
227 aa  78.6  0.00000000000008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  25.59 
 
 
224 aa  77.8  0.0000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  25.12 
 
 
229 aa  77.8  0.0000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  21.2 
 
 
236 aa  77.8  0.0000000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  25.95 
 
 
250 aa  77.8  0.0000000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  25.12 
 
 
246 aa  77.4  0.0000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  23.23 
 
 
230 aa  77.4  0.0000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0916  transcriptional regulator, Crp/Fnr family  24.42 
 
 
242 aa  77.4  0.0000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  76.6  0.0000000000003  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  23.23 
 
 
230 aa  76.3  0.0000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  23.23 
 
 
230 aa  76.3  0.0000000000003  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  76.6  0.0000000000003  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  76.6  0.0000000000003  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  22.17 
 
 
224 aa  76.3  0.0000000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  23.23 
 
 
230 aa  76.3  0.0000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  76.6  0.0000000000003  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  25.4 
 
 
250 aa  76.6  0.0000000000003  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  23.23 
 
 
230 aa  76.3  0.0000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  23.23 
 
 
226 aa  75.9  0.0000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  28.12 
 
 
222 aa  76.3  0.0000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  20.74 
 
 
236 aa  75.5  0.0000000000006  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  25.68 
 
 
249 aa  75.5  0.0000000000007  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  24.06 
 
 
236 aa  75.1  0.0000000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  23.64 
 
 
225 aa  75.1  0.0000000000008  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  26.94 
 
 
250 aa  75.1  0.0000000000008  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  22.73 
 
 
230 aa  75.1  0.0000000000009  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  22.73 
 
 
230 aa  74.7  0.0000000000009  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.97 
 
 
237 aa  75.1  0.0000000000009  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_010531  Pnec_1040  cyclic nucleotide-binding protein  25.49 
 
 
238 aa  75.1  0.0000000000009  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.464794 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  24.49 
 
 
228 aa  74.3  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_1843  fumarate/nitrate reduction transcriptional regulator  25.93 
 
 
250 aa  74.3  0.000000000001  Shewanella denitrificans OS217  Bacteria  normal  0.0177159  n/a   
 
 
-
 
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