| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1843 |
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| Symbol | |
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| ID | 4018326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2169991 |
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| End bp | 2170743 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955860 |
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| Product | fumarate/nitrate reduction transcriptional regulator |
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| Protein accession | YP_562850 |
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| Protein GI | 91793199 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0177159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATGA TAGTGACTTC AAAAAAATCG AGCCGCAATG CTAACTCAGG CTGCGCTATA
CATTGTAACG ATTGCAGCAT GTCCGAGCTG TGTATCCCGT TCACCCTCAA TGCCAATGAA
CTTGAGGAAC TGGATAACAT CATAGAGCGG AAAAAGCCGG TGCAAAAAGG CGATAAACTG
TTTCAATCTG GTGATGGCCT TAAGTCCTTG TATGCAATCC GCTCGGGCAC CATCAAGAGT
TACACCATTA CTCAGCAAGG TGATGAACAG ATCACGGGTT TTCACTTAGC CGGTGATGTT
ATAGGCTTTG ATGCCATTCA TAAACAGGCT CATCAAAGTT TTGCTGAAGC CCTTGAAACC
TCGATGATTT GTGAAATTCC TTTCGATACC TTAGATAGCC TAGCCGGCAC TATGCCTAAA
CTTAGGCAGC AAATCATGCG CCTGATGAGT CACGAAATTA TCAGCGATCA AGAAATGATT
TTATTGCTGT CTAAGAAAAA TGCCGAAGAA CGTCTCGCCG CCTTTATTGC TAAATTAGCC
AACCGCTTTG CTAACCGCGG CTTCTCCCCT AATGAGTTTC GCCTCTCCAT GACCCGCGGC
GACATAGGTA ATTACCTGGG CTTGACCGTG GAAACCATCA GCCGCTTATT GGGGCGTTTT
CAAAAAGCGC AGATGATTGC CGTCAACGGG AAATACATCA CTATTGTTGA TCATCAGGCG
CTCAATACAC TGGCCGACCA CACCGAGCAA TAA
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| Protein sequence | MDMIVTSKKS SRNANSGCAI HCNDCSMSEL CIPFTLNANE LEELDNIIER KKPVQKGDKL
FQSGDGLKSL YAIRSGTIKS YTITQQGDEQ ITGFHLAGDV IGFDAIHKQA HQSFAEALET
SMICEIPFDT LDSLAGTMPK LRQQIMRLMS HEIISDQEMI LLLSKKNAEE RLAAFIAKLA
NRFANRGFSP NEFRLSMTRG DIGNYLGLTV ETISRLLGRF QKAQMIAVNG KYITIVDHQA
LNTLADHTEQ
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