| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5556 |
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| Symbol | |
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| ID | 8361733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7093703 |
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| End bp | 7094761 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967700 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003125184 |
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| Protein GI | 256424531 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.487576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0420739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TCCTGCTGAT AGAAGATAAT GACGATATTC GCGAAAATAC TGCCGAAATA
CTGGAACTTG CCAATTACAG GGTCCTGACG GCTGAAAATG GGAAAACCGG CGTGGAAATG
GCTCTGGAAG AACTGCCCGA CCTGATCGTA TGTGATATTA TGATGCCTGT GCTGGATGGT
TATGGCGTAC TGCACCTGTT GCAAAAACAC CCGGAAGTCG AAGATACCCC TTTCATATTC
CTCACCGCCA AAAGCGAACG CGGAGACTTC CGCAAAGGAA TGGAAATGGG CGCAGACGAT
TATATCACCA AACCTTTCAG CGGTACAGAC CTTTTAAATG CAGTAGAAAG CAGATTAAAA
AAGTCAGAAC TTAAAAAACA GGTGTTACCT GCAGATATGG AAGGAGTACA ACAACTGCTG
TTGACAGCTA CAGGCGCTAA TCCTCTGAAA ACATTGATGG AAGAGGGTAA TACAGACAGG
TACAAAAAGA AACAACTGAT TTACCAGGAA GGTAATCGTC CGACCAGCCT TTATTTTATC
CAGAAAGGCC GTGTGAAAAC CTATAAGGTG AACAACGACG GAAAAGAGCT CGCTGTCAAT
CTGTACAGCG CCGGCGAATT CCTCGGATAC GTCGCCCTGC TCGAAGGCAG CAACTACCAT
GAAAACGCCG AAGCACTGGA AGCTTGCGAA CTGACCGCTA TTCCCAGAGA GGATTTTGAA
ACGCTGATCA ATAATAACCG CGAAGTAGCA CAACAATTCA TCCGCCTGCT CGCTAAAAAT
ATCACAGAAA AAGAACAGCA ACTGCTGCAC CTTGCCTATA GTTCACTGCG TAAAAAAGTA
GCAGAAGCAT TGCTCTTCCT GAAAAAGAAA TACCATCACG TAACTGACCA GCCGTTCTCC
ATAGATATCT CCCGCGAAAA CCTCGCTACC ATCGCAGGTA CCGCTACGGA ATCCATGATC
CGTACACTGG GCGACTTCAG AGACGAGAAA CTACTGGAAA TAAAACAGGG CGTCATCACC
ATCCTGAATG AACAGAAACT CGCCAACCTG GTGAATTAA
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| Protein sequence | MKTILLIEDN DDIRENTAEI LELANYRVLT AENGKTGVEM ALEELPDLIV CDIMMPVLDG
YGVLHLLQKH PEVEDTPFIF LTAKSERGDF RKGMEMGADD YITKPFSGTD LLNAVESRLK
KSELKKQVLP ADMEGVQQLL LTATGANPLK TLMEEGNTDR YKKKQLIYQE GNRPTSLYFI
QKGRVKTYKV NNDGKELAVN LYSAGEFLGY VALLEGSNYH ENAEALEACE LTAIPREDFE
TLINNNREVA QQFIRLLAKN ITEKEQQLLH LAYSSLRKKV AEALLFLKKK YHHVTDQPFS
IDISRENLAT IAGTATESMI RTLGDFRDEK LLEIKQGVIT ILNEQKLANL VN
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