More than 300 homologs were found in PanDaTox collection
for query gene Cagg_2668 on replicon NC_011831
Organism: Chloroflexus aggregans DSM 9485



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011831  Cagg_2668  transcriptional regulator, Crp/Fnr family  100 
 
 
225 aa  454  1e-127  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0967754  hitchhiker  0.000000348595 
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  58.46 
 
 
228 aa  224  1e-57  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  51.94 
 
 
227 aa  209  4e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_011831  Cagg_2027  transcriptional regulator, Crp/Fnr family  46.6 
 
 
226 aa  184  9e-46  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1070  Crp/FNR family transcriptional regulator  36.68 
 
 
235 aa  121  7e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.105875  normal 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  30.81 
 
 
231 aa  116  3e-25  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  33.5 
 
 
240 aa  114  8.999999999999998e-25  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  33.5 
 
 
236 aa  112  5e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  32.99 
 
 
239 aa  112  6e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  31.82 
 
 
236 aa  111  1.0000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  31.44 
 
 
234 aa  111  1.0000000000000001e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  32.04 
 
 
235 aa  111  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  30.81 
 
 
233 aa  110  2.0000000000000002e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  28.71 
 
 
231 aa  109  4.0000000000000004e-23  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  28.71 
 
 
231 aa  109  4.0000000000000004e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  27.78 
 
 
232 aa  107  2e-22  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  28.37 
 
 
231 aa  106  2e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  27.78 
 
 
232 aa  107  2e-22  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  27.7 
 
 
231 aa  107  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  28.5 
 
 
250 aa  106  3e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  31.47 
 
 
236 aa  106  4e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  31.73 
 
 
257 aa  105  5e-22  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  33.81 
 
 
239 aa  104  1e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  31.28 
 
 
240 aa  103  2e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  29.03 
 
 
249 aa  103  2e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  28.5 
 
 
243 aa  102  5e-21  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  27.62 
 
 
232 aa  101  8e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  29.8 
 
 
233 aa  99.8  3e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  29.8 
 
 
233 aa  99.8  3e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  28.16 
 
 
229 aa  99  6e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  28.93 
 
 
233 aa  95.5  6e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  26.4 
 
 
234 aa  94.7  1e-18  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  23.74 
 
 
242 aa  90.1  2e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  25.36 
 
 
227 aa  88.6  8e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  25.7 
 
 
241 aa  88.2  9e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  27.57 
 
 
220 aa  87.8  1e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  25.6 
 
 
252 aa  88.2  1e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009507  Swit_5204  CRP/FNR family transcriptional regulator  29.68 
 
 
261 aa  87.8  1e-16  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.26828 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  30.46 
 
 
256 aa  87  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  28.23 
 
 
225 aa  87.4  2e-16  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  28.44 
 
 
228 aa  87.4  2e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_008528  OEOE_0355  Crp-like transcriptional regulator  28.79 
 
 
221 aa  86.7  3e-16  Oenococcus oeni PSU-1  Bacteria  normal  0.128458  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  27.23 
 
 
226 aa  86.3  4e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  29.67 
 
 
227 aa  85.5  6e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  25.36 
 
 
230 aa  84.7  0.000000000000001  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_008496  LEUM_A06  Crp-like transcriptional regulator  22.73 
 
 
230 aa  84.7  0.000000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  28.34 
 
 
234 aa  82.8  0.000000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2535  CRP/FNR family transcriptional regulator  25.84 
 
 
226 aa  82.8  0.000000000000004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  26.77 
 
 
226 aa  82.8  0.000000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.31 
 
 
225 aa  82.4  0.000000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  25.73 
 
 
224 aa  82  0.000000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  26.9 
 
 
227 aa  82  0.000000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  27.78 
 
 
225 aa  81.6  0.000000000000008  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  23.72 
 
 
225 aa  81.6  0.000000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  23.61 
 
 
244 aa  81.6  0.000000000000009  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  23.61 
 
 
244 aa  81.6  0.000000000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  28.49 
 
 
247 aa  80.9  0.00000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  28.9 
 
 
236 aa  81.3  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  26.79 
 
 
225 aa  81.3  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  26.79 
 
 
225 aa  80.9  0.00000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  24.42 
 
 
244 aa  80.9  0.00000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  29.23 
 
 
225 aa  80.9  0.00000000000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  26.4 
 
 
227 aa  80.5  0.00000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  24.42 
 
 
244 aa  80.5  0.00000000000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  24.42 
 
 
244 aa  80.9  0.00000000000002  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  24.42 
 
 
244 aa  80.9  0.00000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  24.15 
 
 
229 aa  79.7  0.00000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  25.23 
 
 
225 aa  79.7  0.00000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  26.79 
 
 
228 aa  79.7  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  25.73 
 
 
235 aa  79.3  0.00000000000004  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  25.12 
 
 
226 aa  79.7  0.00000000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.44 
 
 
242 aa  79  0.00000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  25 
 
 
244 aa  78.6  0.00000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_008789  Hhal_0917  CRP/FNR family transcriptional regulator  26.92 
 
 
254 aa  77.4  0.0000000000001  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  27.75 
 
 
254 aa  77.8  0.0000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  25 
 
 
230 aa  77.8  0.0000000000001  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  26.96 
 
 
229 aa  77.4  0.0000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  26.94 
 
 
230 aa  77.4  0.0000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  27.04 
 
 
261 aa  77  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  22.71 
 
 
244 aa  76.6  0.0000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  23.5 
 
 
244 aa  76.6  0.0000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  26.84 
 
 
239 aa  76.6  0.0000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  25.26 
 
 
352 aa  76.6  0.0000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  27.41 
 
 
239 aa  76.3  0.0000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.19 
 
 
224 aa  76.3  0.0000000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  24.54 
 
 
230 aa  75.9  0.0000000000004  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  26.13 
 
 
254 aa  75.9  0.0000000000005  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  21.5 
 
 
244 aa  75.9  0.0000000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  26.9 
 
 
239 aa  75.5  0.0000000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  21.32 
 
 
254 aa  75.1  0.0000000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  26.07 
 
 
260 aa  75.1  0.0000000000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.07 
 
 
219 aa  75.1  0.0000000000008  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  23.19 
 
 
244 aa  75.1  0.0000000000008  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  24.17 
 
 
226 aa  75.1  0.0000000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  20.85 
 
 
250 aa  74.7  0.000000000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  21.32 
 
 
250 aa  74.3  0.000000000001  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  28.06 
 
 
224 aa  74.7  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  26.19 
 
 
246 aa  73.9  0.000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  24.62 
 
 
229 aa  73.9  0.000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.73 
 
 
227 aa  73.9  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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