| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2039 |
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| Symbol | |
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| ID | 5455398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2226354 |
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| End bp | 2227082 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877616 |
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| Product | CRP/FNR family transcriptional regulator |
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| Protein accession | YP_001413310 |
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| Protein GI | 154252486 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.191538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.00387918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTATCA CCGCCATCCA AGCTGTTTCT CCACGGTCCA TCCACCGCTA CGCCGCCGGG
GCACCAGCCG CGCGCCAGAG GCCGGAGGCT GACGGCCGGG GGAACATCTC TCTGCTGCGG
AGCAGCGACA CGACACTGAA GTTCGAACGC AACCAGACGA TATACAGCGA GGGCGAACGC
GCTCTGTTCT CCTACCGGGT GGTGAGCGGG GCGGTGCGGC TGTGCAAGAT CTTTTCCGAC
GGCCGCCGTC AGATCTCGGA TTTCTGCCTT GCGGGGGACT TCTTCGGCTT CGCCTCGCCG
GACGATTATA CGCTGACCGC CGAGGCCGTG AACGACACGA TCCTCGTCCG CTATTCTTCC
GGACAAATCG ACTGTCTCGG ACAAACGTCG CCGGATCTTC GCGATCAATT GATGGCCCTT
CTCTATCGCG GTCTTTCCGA TGCCCGGAAC CATCTGTTCA TGCTCGGCCG CCAGACCGTC
AAGGAGCGCG TGTCCTCGTT CCTGCTCATG ATGCTGGAGC GTCAGGGCTG CGCGGGCAGG
ACGGGCGACC GGCTGGATCT GCCGATGGGA CGGCAGGACA TAGCTGACTA TCTCGGCCTG
ACCATCGAAA CGGTATGCCG CGCACTGAGC GACCTGAAGC GCGCCGGCGT CATCTCGGCG
CCGAGCAAAC GCGCAATCAT CGTGAAGAAT GCCGGCCTCC TTCGGGCCAT GGCATTGGGT
GAAGCCTGA
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| Protein sequence | MSITAIQAVS PRSIHRYAAG APAARQRPEA DGRGNISLLR SSDTTLKFER NQTIYSEGER
ALFSYRVVSG AVRLCKIFSD GRRQISDFCL AGDFFGFASP DDYTLTAEAV NDTILVRYSS
GQIDCLGQTS PDLRDQLMAL LYRGLSDARN HLFMLGRQTV KERVSSFLLM MLERQGCAGR
TGDRLDLPMG RQDIADYLGL TIETVCRALS DLKRAGVISA PSKRAIIVKN AGLLRAMALG
EA
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