More than 300 homologs were found in PanDaTox collection
for query gene Gura_2323 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  100 
 
 
233 aa  475  1e-133  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  58.77 
 
 
226 aa  264  8.999999999999999e-70  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  54.67 
 
 
221 aa  255  4e-67  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  52.86 
 
 
238 aa  255  5e-67  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0750  Crp/FNR family transcriptional regulator  51.39 
 
 
238 aa  241  7.999999999999999e-63  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  49.55 
 
 
238 aa  236  2e-61  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  45.83 
 
 
238 aa  217  1e-55  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  44.05 
 
 
238 aa  214  9e-55  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  37.85 
 
 
250 aa  159  3e-38  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  32.72 
 
 
225 aa  126  2.0000000000000002e-28  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  34.6 
 
 
232 aa  125  4.0000000000000003e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  35.9 
 
 
225 aa  125  5e-28  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  31.28 
 
 
219 aa  117  1.9999999999999998e-25  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  34.39 
 
 
231 aa  114  1.0000000000000001e-24  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  30.33 
 
 
236 aa  114  2.0000000000000002e-24  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.3 
 
 
227 aa  113  3e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  30.33 
 
 
236 aa  113  3e-24  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.44 
 
 
229 aa  109  4.0000000000000004e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  28.51 
 
 
225 aa  109  4.0000000000000004e-23  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  30.39 
 
 
226 aa  108  7.000000000000001e-23  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  27.96 
 
 
226 aa  106  3e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  31.03 
 
 
231 aa  103  2e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  29.58 
 
 
224 aa  103  2e-21  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  30.52 
 
 
225 aa  103  2e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  29.32 
 
 
228 aa  102  4e-21  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  30.59 
 
 
225 aa  102  4e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  30.88 
 
 
243 aa  102  5e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  27.96 
 
 
236 aa  102  6e-21  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  27.18 
 
 
239 aa  102  7e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  26.48 
 
 
228 aa  101  8e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  30.14 
 
 
225 aa  101  1e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  28.72 
 
 
228 aa  101  1e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  27.49 
 
 
236 aa  101  1e-20  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  30.33 
 
 
225 aa  99.4  5e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.85 
 
 
228 aa  99  6e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  27.35 
 
 
248 aa  98.6  8e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  26.98 
 
 
222 aa  97.4  2e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  27.92 
 
 
225 aa  95.9  4e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  26.54 
 
 
234 aa  96.3  4e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  28.37 
 
 
229 aa  95.9  5e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  26.73 
 
 
226 aa  95.9  5e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.65 
 
 
226 aa  94.4  1e-18  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  28.22 
 
 
223 aa  94.7  1e-18  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  28.79 
 
 
225 aa  94  2e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  28.84 
 
 
228 aa  93.6  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  26.9 
 
 
225 aa  94  2e-18  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  24.87 
 
 
251 aa  93.6  3e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  26.17 
 
 
226 aa  92  7e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0098  CRP/FNR family transcriptional regulator  30.61 
 
 
234 aa  92  7e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.2435  normal 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  29.74 
 
 
220 aa  92  8e-18  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  32.39 
 
 
348 aa  91.7  1e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  27.62 
 
 
225 aa  90.9  2e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.93 
 
 
227 aa  90.5  2e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  29.1 
 
 
240 aa  90.1  2e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.57 
 
 
242 aa  89.4  5e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  26.61 
 
 
222 aa  87.8  1e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  29.74 
 
 
355 aa  87.4  2e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  27.49 
 
 
236 aa  87  2e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  31.34 
 
 
234 aa  87.4  2e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  30.93 
 
 
352 aa  87.4  2e-16  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  28 
 
 
249 aa  86.3  3e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  27.36 
 
 
252 aa  86.7  3e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  30.77 
 
 
214 aa  85.9  4e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  27.36 
 
 
222 aa  86.3  4e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_008262  CPR_1062  Crp/FNR family transcriptional regulator  27.01 
 
 
236 aa  85.9  5e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  26.42 
 
 
236 aa  85.5  7e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.67 
 
 
227 aa  85.1  8e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  24.53 
 
 
225 aa  85.1  9e-16  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  30.26 
 
 
220 aa  84.3  0.000000000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  28.44 
 
 
354 aa  84.3  0.000000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  26.83 
 
 
225 aa  84.3  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  26.92 
 
 
234 aa  84  0.000000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  26.4 
 
 
226 aa  83.6  0.000000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  27.32 
 
 
231 aa  82.8  0.000000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  28.43 
 
 
227 aa  82.8  0.000000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  29.33 
 
 
227 aa  82.8  0.000000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  25.85 
 
 
224 aa  82.8  0.000000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  28.21 
 
 
227 aa  82.4  0.000000000000006  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.5 
 
 
227 aa  81.6  0.000000000000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.3 
 
 
225 aa  81.6  0.000000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_009441  Fjoh_1583  CRP/FNR family transcriptional regulator  29.35 
 
 
198 aa  80.9  0.00000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  29.17 
 
 
232 aa  81.3  0.00000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  28.84 
 
 
227 aa  80.5  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  25 
 
 
225 aa  80.1  0.00000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007960  Nham_4375  Crp/FNR family transcriptional regulator  30.86 
 
 
268 aa  79.7  0.00000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.8 
 
 
254 aa  80.1  0.00000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  27.72 
 
 
236 aa  79.7  0.00000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  24.37 
 
 
247 aa  79  0.00000000000005  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  26.47 
 
 
229 aa  79.3  0.00000000000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  23.5 
 
 
224 aa  79.3  0.00000000000005  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  29.17 
 
 
230 aa  79  0.00000000000006  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  28.99 
 
 
230 aa  79  0.00000000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  25.77 
 
 
236 aa  79  0.00000000000006  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  29.17 
 
 
226 aa  79  0.00000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  26.9 
 
 
224 aa  78.6  0.00000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0349  transcriptional regulator, Crp/Fnr family  25.84 
 
 
219 aa  78.6  0.00000000000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000181532  n/a   
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  24.43 
 
 
257 aa  78.2  0.00000000000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3455  Crp/FNR family transcriptional regulator  26.64 
 
 
237 aa  78.2  0.0000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.063385 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  25.63 
 
 
239 aa  78.2  0.0000000000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  24.39 
 
 
228 aa  77.8  0.0000000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
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