More than 300 homologs were found in PanDaTox collection
for query gene GM21_3198 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  100 
 
 
221 aa  447  1e-125  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  98.19 
 
 
238 aa  439  9.999999999999999e-123  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  54.67 
 
 
233 aa  255  4e-67  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  50.7 
 
 
226 aa  237  1e-61  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  48.6 
 
 
238 aa  225  4e-58  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_007517  Gmet_0750  Crp/FNR family transcriptional regulator  46.23 
 
 
238 aa  215  5e-55  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  43.78 
 
 
238 aa  206  3e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  42.86 
 
 
238 aa  204  6e-52  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  40.19 
 
 
250 aa  164  6.9999999999999995e-40  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  29.72 
 
 
231 aa  124  1e-27  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  29.38 
 
 
226 aa  121  7e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  27.75 
 
 
225 aa  119  4.9999999999999996e-26  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  29.25 
 
 
225 aa  117  9.999999999999999e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  31.77 
 
 
226 aa  116  3e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  28.57 
 
 
232 aa  115  3.9999999999999997e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.67 
 
 
219 aa  114  1.0000000000000001e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  29.69 
 
 
227 aa  107  2e-22  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  30.81 
 
 
224 aa  106  2e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  28.5 
 
 
239 aa  106  3e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  31.16 
 
 
243 aa  103  2e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.23 
 
 
225 aa  102  6e-21  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25.59 
 
 
236 aa  101  7e-21  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.59 
 
 
236 aa  102  7e-21  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  31.9 
 
 
225 aa  98.6  7e-20  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  31.91 
 
 
225 aa  98.2  8e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  29.13 
 
 
226 aa  98.2  8e-20  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  24.64 
 
 
236 aa  98.2  8e-20  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  24.64 
 
 
236 aa  97.4  1e-19  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.77 
 
 
226 aa  97.8  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  27.84 
 
 
251 aa  97.8  1e-19  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  30 
 
 
225 aa  97.8  1e-19  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  30.05 
 
 
220 aa  97.4  2e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  30.43 
 
 
248 aa  97.1  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  30 
 
 
225 aa  97.4  2e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  28.36 
 
 
223 aa  96.7  3e-19  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  28.57 
 
 
228 aa  96.7  3e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  29.13 
 
 
228 aa  95.5  5e-19  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.67 
 
 
228 aa  94.4  1e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  28.72 
 
 
222 aa  94.4  1e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  25.59 
 
 
234 aa  94  2e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.84 
 
 
226 aa  94  2e-18  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  29.74 
 
 
228 aa  93.2  3e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  29.05 
 
 
225 aa  92  6e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  29.69 
 
 
252 aa  92  7e-18  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  26.06 
 
 
229 aa  90.9  1e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  31.96 
 
 
225 aa  91.3  1e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  28.57 
 
 
225 aa  90.1  2e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.69 
 
 
229 aa  89.7  3e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  27.96 
 
 
236 aa  89  5e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  26.77 
 
 
247 aa  88.2  8e-17  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  26.57 
 
 
225 aa  88.2  1e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  28.79 
 
 
227 aa  87  2e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  27.67 
 
 
225 aa  86.7  3e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  31.98 
 
 
232 aa  86.3  3e-16  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  26.2 
 
 
240 aa  85.9  4e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  25.82 
 
 
227 aa  85.9  5e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  28.88 
 
 
229 aa  85.5  5e-16  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.79 
 
 
227 aa  85.1  7e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  26.54 
 
 
222 aa  84  0.000000000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  26.83 
 
 
224 aa  84  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  26.76 
 
 
224 aa  83.6  0.000000000000002  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  29.5 
 
 
236 aa  83.2  0.000000000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  27.23 
 
 
225 aa  82.8  0.000000000000003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  26.92 
 
 
222 aa  83.2  0.000000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.1 
 
 
242 aa  82.8  0.000000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  31.16 
 
 
232 aa  82.8  0.000000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  28.78 
 
 
234 aa  82.4  0.000000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_003910  CPS_2085  cyclic nucleotide binding protein  26.98 
 
 
238 aa  82.4  0.000000000000005  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  28.12 
 
 
234 aa  82.4  0.000000000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  27.27 
 
 
227 aa  82.4  0.000000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011830  Dhaf_2762  transcriptional regulator, Crp/Fnr family  29.63 
 
 
234 aa  82  0.000000000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  27.67 
 
 
227 aa  81.6  0.000000000000009  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3275  transcriptional regulator, Crp/Fnr family  29.21 
 
 
195 aa  81.3  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0513046  hitchhiker  0.00943034 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  27.23 
 
 
228 aa  81.3  0.00000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  28.5 
 
 
227 aa  80.1  0.00000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  26.97 
 
 
230 aa  80.1  0.00000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.4 
 
 
237 aa  80.9  0.00000000000002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  26.4 
 
 
230 aa  79  0.00000000000005  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  27.84 
 
 
230 aa  79  0.00000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  26.32 
 
 
226 aa  79  0.00000000000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  24.76 
 
 
226 aa  78.6  0.00000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  26.51 
 
 
232 aa  78.6  0.00000000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  25.84 
 
 
230 aa  78.6  0.00000000000007  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  27.36 
 
 
214 aa  78.2  0.00000000000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  24.26 
 
 
234 aa  78.2  0.00000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  26.4 
 
 
230 aa  78.2  0.00000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.55 
 
 
225 aa  78.2  0.00000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  29.81 
 
 
237 aa  77.4  0.0000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  26.4 
 
 
230 aa  77.8  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  26.4 
 
 
230 aa  77.8  0.0000000000001  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  26.4 
 
 
230 aa  77.8  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  23.27 
 
 
231 aa  77.4  0.0000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  26.4 
 
 
226 aa  77.8  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  26.94 
 
 
254 aa  77.8  0.0000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  26.89 
 
 
236 aa  77.8  0.0000000000001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  26.57 
 
 
224 aa  77  0.0000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  26.8 
 
 
224 aa  77  0.0000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  25.59 
 
 
229 aa  77  0.0000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  26.74 
 
 
223 aa  77  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_1583  CRP/FNR family transcriptional regulator  24.6 
 
 
198 aa  76.6  0.0000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
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