Gene Dred_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3227 
Symbol 
ID4957389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3510210 
End bp3510908 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content35% 
IMG OID640182415 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_001114554 
Protein GI134301058 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAGAAG AAATTGATCC GTTGATTTCA GTGCTTCCCT TTTTAGATGT GAAGGAAGAG 
AGTTTCAAAG AATATATTCA TCTGGGAATG AAGCAAAAAT ATAAAAAAGG TTCCTATATT
TTAGAACAGG GAGAAGTAGG TAGAAACATT TATTATCTAA ATAAGGGTAA AGTCAAAATA
CAGCAACTTA CTGAAAACGG TGAAGAGAAA TTATTCTGGT ATGCCTCAGA AGGGTTTATT
ATCGGGGATG TTCCTTATTT TCATGCTTTT CCTTCCAATG CTGCTTTAAT AGCGGAAGAA
GATTGTGAAT TATACACCTT TGATAAGTGT ACCTTTAACA AAATTTTAAG GGAAAACCCA
GGCTTTGCAG AATGTTTGCT GGAAATGATG GCAATAAAAA TAAGACTCTT AATCAGTCAA
ATTCATGACA TTAGTTTTAG TAATCCGGCC ACTAGAATTA GTAAACTATT ATACATGCTC
TCCCACCGTT ATGGACAAGA ACGCTCCGAA GGAACAGAGA TAACCCTTGA CATTACACAT
AAAGAAATTG GTTCTATAAC CTGTATTCAT CGCGTAACCG TAACAAATGT GATCAGTAGC
TTGAAAAAAC AAGGCATCAT CGACAAATGT ACCAAGGGTC ATATTGTTAT TAAGGATATG
AATAAATTAT ATGAAAATGC ATTTGGCAAC AGCCATTAG
 
Protein sequence
MREEIDPLIS VLPFLDVKEE SFKEYIHLGM KQKYKKGSYI LEQGEVGRNI YYLNKGKVKI 
QQLTENGEEK LFWYASEGFI IGDVPYFHAF PSNAALIAEE DCELYTFDKC TFNKILRENP
GFAECLLEMM AIKIRLLISQ IHDISFSNPA TRISKLLYML SHRYGQERSE GTEITLDITH
KEIGSITCIH RVTVTNVISS LKKQGIIDKC TKGHIVIKDM NKLYENAFGN SH