More than 300 homologs were found in PanDaTox collection
for query gene Fjoh_1583 on replicon NC_009441
Organism: Flavobacterium johnsoniae UW101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009441  Fjoh_1583  CRP/FNR family transcriptional regulator  100 
 
 
198 aa  404  1.0000000000000001e-112  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
NC_013132  Cpin_3275  transcriptional regulator, Crp/Fnr family  47.78 
 
 
195 aa  192  2e-48  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0513046  hitchhiker  0.00943034 
 
 
-
 
NC_009441  Fjoh_4053  CRP/FNR family transcriptional regulator  42.35 
 
 
211 aa  159  3e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1849  cyclic nucleotide-binding  41.53 
 
 
195 aa  157  1e-37  Pedobacter heparinus DSM 2366  Bacteria  hitchhiker  0.00134256  normal  0.103049 
 
 
-
 
NC_013037  Dfer_0691  transcriptional regulator, Crp/Fnr family  40.5 
 
 
214 aa  150  1e-35  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.275069  normal 
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  32.29 
 
 
226 aa  92  5e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.57 
 
 
229 aa  92  5e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  30.86 
 
 
236 aa  90.5  1e-17  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  30.57 
 
 
225 aa  90.9  1e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  30.1 
 
 
226 aa  89.7  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  30.29 
 
 
236 aa  89.7  3e-17  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  26.52 
 
 
231 aa  89  5e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  30.61 
 
 
238 aa  89  5e-17  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  24.46 
 
 
236 aa  87  2e-16  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  27.42 
 
 
227 aa  86.7  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  27.42 
 
 
227 aa  87  2e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  31.02 
 
 
238 aa  86.3  2e-16  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  28.34 
 
 
229 aa  86.7  2e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  31.18 
 
 
238 aa  86.3  3e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  30.22 
 
 
236 aa  85.9  3e-16  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  28.04 
 
 
239 aa  85.9  4e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  29.44 
 
 
236 aa  85.5  5e-16  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  28.73 
 
 
231 aa  84.3  9e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  24.75 
 
 
248 aa  84.3  9e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  26.34 
 
 
228 aa  84  0.000000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  21.2 
 
 
229 aa  83.6  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  27.32 
 
 
232 aa  83.2  0.000000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  29.32 
 
 
225 aa  83.2  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.32 
 
 
241 aa  82.4  0.000000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  28.18 
 
 
231 aa  82.4  0.000000000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  25.38 
 
 
227 aa  82.4  0.000000000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  28.18 
 
 
231 aa  82.4  0.000000000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  28.02 
 
 
224 aa  82  0.000000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  28.12 
 
 
231 aa  81.6  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  26.46 
 
 
236 aa  81.6  0.000000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  23.71 
 
 
229 aa  81.3  0.000000000000008  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  25.4 
 
 
230 aa  81.3  0.000000000000009  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.53 
 
 
231 aa  80.9  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  29.35 
 
 
233 aa  80.9  0.00000000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  26.4 
 
 
232 aa  80.9  0.00000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  28.02 
 
 
355 aa  80.1  0.00000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  28.07 
 
 
247 aa  79  0.00000000000004  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  24.73 
 
 
227 aa  79  0.00000000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  26.32 
 
 
240 aa  79.3  0.00000000000004  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  27.57 
 
 
225 aa  79  0.00000000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  27.69 
 
 
228 aa  78.6  0.00000000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  26.9 
 
 
236 aa  77.8  0.00000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  26.37 
 
 
354 aa  77.4  0.0000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  23.68 
 
 
250 aa  77.8  0.0000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  25.41 
 
 
239 aa  77.4  0.0000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  24.08 
 
 
251 aa  76.6  0.0000000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  24.08 
 
 
251 aa  76.6  0.0000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  24.6 
 
 
238 aa  76.6  0.0000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  28 
 
 
231 aa  77  0.0000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  28.88 
 
 
219 aa  77  0.0000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  24.08 
 
 
251 aa  76.6  0.0000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  24.6 
 
 
221 aa  76.6  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  24.08 
 
 
251 aa  76.6  0.0000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  25.99 
 
 
348 aa  76.6  0.0000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  25.97 
 
 
222 aa  75.9  0.0000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.41 
 
 
242 aa  75.5  0.0000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  23.56 
 
 
251 aa  75.5  0.0000000000005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  26.23 
 
 
232 aa  75.5  0.0000000000005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.32 
 
 
228 aa  75.5  0.0000000000005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  23.56 
 
 
251 aa  75.5  0.0000000000005  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  26.9 
 
 
236 aa  75.5  0.0000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  23.56 
 
 
251 aa  75.5  0.0000000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  26.52 
 
 
225 aa  75.5  0.0000000000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.27 
 
 
227 aa  75.5  0.0000000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  21.2 
 
 
228 aa  75.1  0.0000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  30.85 
 
 
232 aa  74.7  0.0000000000008  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  24.57 
 
 
352 aa  74.7  0.0000000000008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  25 
 
 
254 aa  74.7  0.0000000000008  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  23.04 
 
 
248 aa  73.9  0.000000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  24.58 
 
 
223 aa  74.3  0.000000000001  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  25.13 
 
 
249 aa  73.9  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  23.56 
 
 
248 aa  74.3  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  21.71 
 
 
232 aa  74.3  0.000000000001  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  24.16 
 
 
224 aa  73.2  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  23.04 
 
 
248 aa  73.9  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  27.64 
 
 
225 aa  73.2  0.000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  28.26 
 
 
226 aa  73.2  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  23.04 
 
 
249 aa  73.6  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  23.04 
 
 
249 aa  73.2  0.000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2085  cyclic nucleotide binding protein  28.65 
 
 
238 aa  73.2  0.000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0894  cyclic nucleotide-binding  21.93 
 
 
226 aa  72.8  0.000000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  25.15 
 
 
236 aa  72.8  0.000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  25.64 
 
 
226 aa  72.8  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.32 
 
 
225 aa  72.4  0.000000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.32 
 
 
225 aa  72  0.000000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  26.26 
 
 
237 aa  71.6  0.000000000006  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  23.16 
 
 
243 aa  72  0.000000000006  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  23.56 
 
 
630 aa  71.6  0.000000000007  Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  27.17 
 
 
226 aa  71.6  0.000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  27.12 
 
 
243 aa  71.2  0.000000000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013526  Tter_2020  transcriptional regulator, Crp/Fnr family  27.32 
 
 
239 aa  71.2  0.000000000009  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0424227  n/a   
 
 
-
 
NC_007948  Bpro_0681  Crp/FNR family transcriptional regulator  25.41 
 
 
234 aa  71.2  0.000000000009  Polaromonas sp. JS666  Bacteria  normal  0.0670228  normal  0.546641 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  24.6 
 
 
226 aa  70.9  0.00000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  25.56 
 
 
222 aa  71.2  0.00000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008543  Bcen2424_5737  Crp/FNR family transcriptional regulator  22.51 
 
 
248 aa  70.9  0.00000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.188641 
 
 
-
 
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