More than 300 homologs were found in PanDaTox collection
for query gene Phep_1849 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_1849  cyclic nucleotide-binding  100 
 
 
195 aa  395  1e-109  Pedobacter heparinus DSM 2366  Bacteria  hitchhiker  0.00134256  normal  0.103049 
 
 
-
 
NC_009441  Fjoh_1583  CRP/FNR family transcriptional regulator  41.53 
 
 
198 aa  157  1e-37  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
NC_013132  Cpin_3275  transcriptional regulator, Crp/Fnr family  41.52 
 
 
195 aa  129  2.0000000000000002e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0513046  hitchhiker  0.00943034 
 
 
-
 
NC_009441  Fjoh_4053  CRP/FNR family transcriptional regulator  33.33 
 
 
211 aa  107  1e-22  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0691  transcriptional regulator, Crp/Fnr family  30.77 
 
 
214 aa  92.4  4e-18  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.275069  normal 
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  28.9 
 
 
354 aa  87.8  8e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  31.1 
 
 
352 aa  85.9  3e-16  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  30.94 
 
 
219 aa  84  0.000000000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  28.49 
 
 
355 aa  80.5  0.00000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  27.78 
 
 
352 aa  79  0.00000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  26.79 
 
 
236 aa  78.6  0.00000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.68 
 
 
231 aa  77  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  29.52 
 
 
238 aa  75.9  0.0000000000003  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.78 
 
 
225 aa  75.9  0.0000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  32.4 
 
 
212 aa  75.1  0.0000000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  26.97 
 
 
226 aa  75.1  0.0000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  28.48 
 
 
348 aa  75.1  0.0000000000007  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  27.78 
 
 
233 aa  74.3  0.000000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.95 
 
 
225 aa  73.9  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  26.63 
 
 
243 aa  70.9  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_009441  Fjoh_4447  CRP/FNR family transcriptional regulator  23.27 
 
 
227 aa  70.9  0.00000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  29.19 
 
 
238 aa  69.7  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  26.37 
 
 
238 aa  70.1  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  26.37 
 
 
221 aa  70.5  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  25.15 
 
 
223 aa  68.6  0.00000000005  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  28.34 
 
 
238 aa  68.6  0.00000000006  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  26.83 
 
 
222 aa  67.8  0.0000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.59 
 
 
225 aa  67  0.0000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008009  Acid345_3455  Crp/FNR family transcriptional regulator  23.2 
 
 
237 aa  67  0.0000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.063385 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  27.53 
 
 
236 aa  67  0.0000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  24.31 
 
 
250 aa  66.6  0.0000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  27.14 
 
 
223 aa  66.2  0.0000000003  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  24.42 
 
 
236 aa  66.2  0.0000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  26.14 
 
 
225 aa  65.9  0.0000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  26.97 
 
 
236 aa  65.9  0.0000000003  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  25.15 
 
 
350 aa  65.9  0.0000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  26.63 
 
 
223 aa  65.9  0.0000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  25.41 
 
 
224 aa  65.1  0.0000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  26.23 
 
 
223 aa  64.3  0.000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  26.19 
 
 
222 aa  63.9  0.000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  26.67 
 
 
224 aa  63.9  0.000000001  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0394  transcriptional regulator, Crp/Fnr family  27.93 
 
 
237 aa  64.3  0.000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  23.3 
 
 
228 aa  64.3  0.000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  27.62 
 
 
243 aa  63.2  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  29.71 
 
 
214 aa  63.2  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  25.81 
 
 
238 aa  62  0.000000006  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  24.62 
 
 
221 aa  61.2  0.000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  25.27 
 
 
210 aa  61.2  0.00000001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  24.07 
 
 
248 aa  60.5  0.00000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  24.87 
 
 
236 aa  60.5  0.00000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  25.57 
 
 
226 aa  61.2  0.00000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  26.26 
 
 
227 aa  60.1  0.00000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  25.79 
 
 
222 aa  60.5  0.00000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.15 
 
 
237 aa  60.1  0.00000002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_009513  Lreu_1425  CRP/FNR family transcriptional regulator  25.28 
 
 
212 aa  60.5  0.00000002  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1678  transcriptional regulator, Crp/Fnr family  25.3 
 
 
234 aa  60.5  0.00000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  26.95 
 
 
227 aa  60.1  0.00000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  24.02 
 
 
224 aa  59.3  0.00000003  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  26.32 
 
 
239 aa  59.3  0.00000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  25.58 
 
 
254 aa  59.7  0.00000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0067  cyclic nucleotide-binding protein  25 
 
 
415 aa  59.3  0.00000004  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  24.85 
 
 
225 aa  59.3  0.00000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  23.93 
 
 
226 aa  58.9  0.00000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008262  CPR_1062  Crp/FNR family transcriptional regulator  27.06 
 
 
236 aa  58.5  0.00000005  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  22.11 
 
 
267 aa  58.5  0.00000005  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  25.97 
 
 
212 aa  58.5  0.00000006  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  24.34 
 
 
236 aa  58.5  0.00000006  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  24.6 
 
 
227 aa  58.2  0.00000007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  22.78 
 
 
239 aa  58.2  0.00000008  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  22.02 
 
 
236 aa  58.2  0.00000008  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.84 
 
 
226 aa  58.2  0.00000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  25.43 
 
 
227 aa  57.8  0.0000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  24.37 
 
 
233 aa  57.4  0.0000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  24.18 
 
 
232 aa  57.8  0.0000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_003910  CPS_2085  cyclic nucleotide binding protein  28.83 
 
 
238 aa  57.4  0.0000001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0880  transcriptional regulator, Crp/Fnr family  22.03 
 
 
219 aa  57.8  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.812688  n/a   
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  21.39 
 
 
225 aa  57.4  0.0000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  24.37 
 
 
233 aa  57.4  0.0000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  27.06 
 
 
236 aa  57.8  0.0000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_008309  HS_0139  cAMP-regulatory protein  26.67 
 
 
214 aa  57.4  0.0000001  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  23.16 
 
 
218 aa  57.4  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  26.52 
 
 
225 aa  57.4  0.0000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_009507  Swit_5204  CRP/FNR family transcriptional regulator  25.71 
 
 
261 aa  57.8  0.0000001  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.26828 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  24.85 
 
 
227 aa  56.6  0.0000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  22.61 
 
 
225 aa  57  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  26.44 
 
 
232 aa  56.6  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0199  Crp/FNR family transcriptional regulator  24.26 
 
 
227 aa  57  0.0000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  22.16 
 
 
217 aa  56.6  0.0000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  24.56 
 
 
222 aa  56.6  0.0000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  23.78 
 
 
226 aa  56.6  0.0000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  22.58 
 
 
242 aa  57  0.0000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  25.71 
 
 
222 aa  56.2  0.0000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4798  cyclic nucleotide-binding protein  24.85 
 
 
227 aa  56.2  0.0000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  25.71 
 
 
222 aa  56.2  0.0000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  23.24 
 
 
225 aa  56.2  0.0000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_007517  Gmet_0750  Crp/FNR family transcriptional regulator  26.06 
 
 
238 aa  55.8  0.0000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  23.63 
 
 
226 aa  56.2  0.0000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_007984  BCI_0548  cAMP-regulatory protein  25.52 
 
 
210 aa  55.8  0.0000004  Baumannia cicadellinicola str. Hc (Homalodisca coagulata)  Bacteria  normal  0.549862  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  25.57 
 
 
224 aa  55.8  0.0000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1666  transcriptional regulator, Crp/Fnr family  25.75 
 
 
250 aa  55.5  0.0000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0506299  n/a   
 
 
-
 
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