More than 300 homologs were found in PanDaTox collection
for query gene Dfer_0691 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_0691  transcriptional regulator, Crp/Fnr family  100 
 
 
214 aa  445  1.0000000000000001e-124  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.275069  normal 
 
 
-
 
NC_009441  Fjoh_1583  CRP/FNR family transcriptional regulator  40.5 
 
 
198 aa  150  2e-35  Flavobacterium johnsoniae UW101  Bacteria  normal  0.547464  n/a   
 
 
-
 
NC_009441  Fjoh_4053  CRP/FNR family transcriptional regulator  37.06 
 
 
211 aa  140  1.9999999999999998e-32  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3275  transcriptional regulator, Crp/Fnr family  35.14 
 
 
195 aa  116  3e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0513046  hitchhiker  0.00943034 
 
 
-
 
NC_013061  Phep_1849  cyclic nucleotide-binding  30.77 
 
 
195 aa  92.4  4e-18  Pedobacter heparinus DSM 2366  Bacteria  hitchhiker  0.00134256  normal  0.103049 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  29.95 
 
 
224 aa  92  5e-18  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.81 
 
 
228 aa  85.5  6e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  26.67 
 
 
243 aa  84  0.000000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  29.73 
 
 
226 aa  83.2  0.000000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.27 
 
 
231 aa  80.9  0.00000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  32 
 
 
226 aa  80.5  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.34 
 
 
219 aa  80.5  0.00000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  26.37 
 
 
250 aa  79.7  0.00000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  24.74 
 
 
243 aa  79  0.00000000000005  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  26.02 
 
 
231 aa  79  0.00000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  30 
 
 
226 aa  78.6  0.00000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.97 
 
 
227 aa  78.6  0.00000000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  30.29 
 
 
226 aa  78.6  0.00000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.43 
 
 
220 aa  77  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  28.49 
 
 
226 aa  75.5  0.0000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  26.67 
 
 
249 aa  75.9  0.0000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.57 
 
 
225 aa  75.1  0.0000000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  30.81 
 
 
224 aa  74.7  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  26.98 
 
 
225 aa  74.7  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  27.66 
 
 
237 aa  73.6  0.000000000002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  29.53 
 
 
225 aa  73.6  0.000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  31.58 
 
 
226 aa  73.2  0.000000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  29.59 
 
 
352 aa  73.2  0.000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  24.87 
 
 
231 aa  73.2  0.000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.47 
 
 
228 aa  72.8  0.000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.94 
 
 
225 aa  72.8  0.000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  27.75 
 
 
236 aa  72.8  0.000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  30.41 
 
 
225 aa  72.4  0.000000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2562  cyclic AMP receptor protein  27.93 
 
 
222 aa  72  0.000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.553837  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  30.29 
 
 
225 aa  72  0.000000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.29 
 
 
225 aa  72  0.000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.99 
 
 
226 aa  72  0.000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  31.55 
 
 
218 aa  72  0.000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_011138  MADE_01198  cyclic nucleotide-binding protein  26.06 
 
 
229 aa  70.9  0.00000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  29.94 
 
 
224 aa  70.9  0.00000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.52 
 
 
227 aa  70.5  0.00000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_009428  Rsph17025_0968  CRP/FNR family transcriptional regulator  24.61 
 
 
233 aa  70.1  0.00000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  28.24 
 
 
232 aa  70.1  0.00000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  24.61 
 
 
243 aa  69.7  0.00000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  26.63 
 
 
225 aa  69.7  0.00000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  25.63 
 
 
232 aa  69.3  0.00000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  27.78 
 
 
348 aa  68.9  0.00000000005  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  30.39 
 
 
228 aa  68.2  0.00000000008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  29.17 
 
 
231 aa  68.2  0.00000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  24.34 
 
 
231 aa  67.8  0.0000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  24.34 
 
 
231 aa  67.8  0.0000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  26.34 
 
 
251 aa  67.8  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  24.61 
 
 
233 aa  67.8  0.0000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  26.77 
 
 
248 aa  67.8  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  25.76 
 
 
236 aa  67.8  0.0000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  24.61 
 
 
233 aa  67.8  0.0000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  29.44 
 
 
242 aa  67.8  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  24.46 
 
 
228 aa  67  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  28.06 
 
 
222 aa  67.4  0.0000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  27.78 
 
 
239 aa  67  0.0000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  28.06 
 
 
222 aa  67.4  0.0000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  26.29 
 
 
232 aa  67  0.0000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_46100  cAMP-regulatory protein  29.94 
 
 
215 aa  66.6  0.0000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  23.53 
 
 
231 aa  66.6  0.0000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  27.33 
 
 
233 aa  66.6  0.0000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  27.68 
 
 
225 aa  66.2  0.0000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  28.73 
 
 
225 aa  66.2  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3367  Crp/FNR family transcriptional regulator  25.53 
 
 
230 aa  65.9  0.0000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30 
 
 
225 aa  65.9  0.0000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  26.04 
 
 
261 aa  65.5  0.0000000005  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  22.78 
 
 
232 aa  65.5  0.0000000006  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  28.04 
 
 
223 aa  65.5  0.0000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  22.78 
 
 
232 aa  65.1  0.0000000007  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  24.35 
 
 
227 aa  65.5  0.0000000007  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_007908  Rfer_3511  Crp/FNR family transcriptional regulator  22.87 
 
 
233 aa  64.7  0.0000000009  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  23.86 
 
 
235 aa  64.3  0.000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  25.26 
 
 
234 aa  64.3  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  26.77 
 
 
236 aa  64.3  0.000000001  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009636  Smed_0098  CRP/FNR family transcriptional regulator  29.95 
 
 
234 aa  64.7  0.000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.2435  normal 
 
 
-
 
NC_009439  Pmen_3943  cAMP-regulatory protein  27.13 
 
 
214 aa  64.3  0.000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  25.38 
 
 
235 aa  64.3  0.000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  28.65 
 
 
230 aa  63.5  0.000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0199  Crp/FNR family transcriptional regulator  25.99 
 
 
227 aa  63.9  0.000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  28.57 
 
 
226 aa  63.5  0.000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  27.42 
 
 
228 aa  63.9  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  28.12 
 
 
234 aa  63.5  0.000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  29.73 
 
 
224 aa  63.5  0.000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  26.82 
 
 
222 aa  63.5  0.000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_008390  Bamb_2589  Crp/FNR family transcriptional regulator  25.26 
 
 
235 aa  63.9  0.000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.0679634  n/a   
 
 
-
 
NC_010084  Bmul_0755  Crp/FNR family transcriptional regulator  24.31 
 
 
235 aa  63.2  0.000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.027549  normal  0.149867 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  28.02 
 
 
236 aa  63.2  0.000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  28.57 
 
 
230 aa  63.2  0.000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  28.57 
 
 
230 aa  63.5  0.000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  28.57 
 
 
230 aa  63.5  0.000000003  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  26.74 
 
 
225 aa  63.2  0.000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  25.25 
 
 
236 aa  63.2  0.000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  28.57 
 
 
230 aa  63.5  0.000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  26.26 
 
 
236 aa  63.2  0.000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_009972  Haur_2884  Crp/FNR family transcriptional regulator  26.4 
 
 
218 aa  63.2  0.000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.161359  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  28.65 
 
 
224 aa  62.8  0.000000004  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
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