| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3367 |
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| Symbol | |
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| ID | 4175144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4039599 |
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| End bp | 4040291 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056398 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_662927 |
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| Protein GI | 109899672 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTATTAG ACTCGATCAG GCCCATTCTT AGTCAAAGTT CTTGGTTCAA ATCACTTCCT
CAAGACGCGA TTGAACAACT TGTCACTGCG GCAAAATTAA AGCGCCTAGA CACAGGTCAA
TTGGTCTATC AAAAGCATGA TTTAGGCGAC GGCTTGTATT GCGTTATGTC AGGTAAGGTG
CGTTTAAGCA ATGTCACACT CGAAGGAAAG GAACTCATTT TAACCTGGAT GCAACCCGGT
AATTGGTTTG GGGAGATTTC ACTGTTTGAC GGATTGCCTC GGGCTCACGA TGCTTATGCA
GATGAGCCCT GTGAGTTACT GAAAATATCG AGTCAGGATT TTAAAGCCTT GCTGATTGAG
CGCCCCACGC TTTACCCACA TTTCATGCGT TTGCTGTGTC AGCGCATTCG CACCACATTT
TCGTTCATCG ATGAAACCGG AAGCTTGTCT CTAAAAGGGA AATTATGCGG CCGCATTTTA
CTATTCGCTG AAGGTTTAGA GCATCAAGCT CCTATCGAAA ACGGCTCGAG CTTGTGCATT
TCTCAAGAGT CTCTGGCCTT GATGCTGCAC AGCTCAAGGC AAACGGTGAA TAAGCTACTG
CAAGAATTAC AGCAGCAAGG CGTTATTAAA GTCCACTATG GGAAAATAAC CATTGTGCAG
CACACCATGC TTAAAACCCT TTGCCAGATT TAG
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| Protein sequence | MLLDSIRPIL SQSSWFKSLP QDAIEQLVTA AKLKRLDTGQ LVYQKHDLGD GLYCVMSGKV
RLSNVTLEGK ELILTWMQPG NWFGEISLFD GLPRAHDAYA DEPCELLKIS SQDFKALLIE
RPTLYPHFMR LLCQRIRTTF SFIDETGSLS LKGKLCGRIL LFAEGLEHQA PIENGSSLCI
SQESLALMLH SSRQTVNKLL QELQQQGVIK VHYGKITIVQ HTMLKTLCQI
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