Gene Fjoh_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4053 
Symbol 
ID5090779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4838730 
End bp4839365 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content33% 
IMG OID644743472 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_001196380 
Protein GI146301789 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTTA ATCATTTTAA TTGCAGTAAT TGTCGACAAA TGCATATTGA TACTGATTTA 
CTTTATACCT GGGGAGCCGT TGCAAAAAAA GTCCCAAAAC ATGCCGTCAT CTTTTTCGAG
AATGACCCGC CCCTTTCCTA TTATCAAATT TTAGAGGGAA CCGTTAAAAT GAGTTATACC
AATGAAGACG GCAAAGATCT TACAATTGGT ATTTTTAATG AAGGAAATAG TTTTGGAGAA
CCGCCCTTAT TTATTGAGCA GCCCTACCCT GCTTCTGCAG AAGCTCAAAC TGATTGTGTA
ATTTTAAAAC TATCAAAAAC CAATTTCTTT TCGCTGCTTG AAGAAAATCC TGAAATACAA
TCAAGGGTTT TAAAACTCTT TGCGTGGAAA ATTTACAATA AAATTGTTTT CTCCAAAAAT
ATAATAAATC ACAAACCAGA ATACCGCATT CAATATTTTC TGGATAATTT AAAAAGACAG
CATAACAGCA AACCTTCTCA GAAAATGAAA ATTCCTTATA CAAGACAGGA GATTGCAGAT
TTCACCGGTC TTCGTGTAGA AACAGTCATT AGAACAATTT CATTAATGAA TAAAAACAAA
AAAATCGAAA TCATCGATCA TAAATTGTTT TACTAA
 
Protein sequence
MILNHFNCSN CRQMHIDTDL LYTWGAVAKK VPKHAVIFFE NDPPLSYYQI LEGTVKMSYT 
NEDGKDLTIG IFNEGNSFGE PPLFIEQPYP ASAEAQTDCV ILKLSKTNFF SLLEENPEIQ
SRVLKLFAWK IYNKIVFSKN IINHKPEYRI QYFLDNLKRQ HNSKPSQKMK IPYTRQEIAD
FTGLRVETVI RTISLMNKNK KIEIIDHKLF Y