| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_1498 |
|---|
| Symbol | |
|---|
| ID | 4069245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 1824111 |
|---|
| End bp | 1824830 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637983507 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_590574 |
|---|
| Protein GI | 94968526 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.163113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTCGC CATACGGACT GGACATCATT GAAGACTGTT TAAGTTGCAA GATGCGGGCT
GAGCACATTT TTTGCGATCT GCCGGCCAGC GCGCTATCCG CTTTCGAAGC CATCAAGTAC
GCCACCGCCT ATCCCAAGAG CGCCGTACTT TTCGTGGAAG GCCAGGCGCC ACGTGGCATC
TTCGTCCTGT GCAAAGGCCG CGTAAAACTC TCCATCTGCT CCACCGACGG CAAAACCCTC
ATCCTGAAGA TCGCCGAACC CGGCGAGGTC CTGGGTCTAA GCGCCACGGT CTCCGGTAAG
ACCTACGAAC TGACCGCAGA AACCATTGAT CCCTGCCAGG TGAACTTTGT CAAACGCGAA
GACTTCCTTC GCTTCCTCAA AGAGCACGCG GACGCCTGCT TCCGTGTGGC AGAACAGTTG
AGCGAAAAGT ACAACACTGC CTGCCGCGAA ATCCGCTCCC TTGGGCTCTC CCATAGCGCC
GCGGAAAAGC TGGCGAAACT TCTTCTGGAA TGGAGCGCGC GCGCCGGTGA ATCGAACAAG
AGCGAGCCGC GCGTACGGCT GGCGCTGACC CACGAAGAAA TCGCCCAGAT GATCGGTACC
TCGCGCGAAA CCGTCACCCG GCTCTTCGCG GAACTTAAAA AGCGGCAGAT CGTGCTCTCT
CGTGGTGCGA CCCTGGTGGT AAAGAACAAG GCTGCGCTTC GTGCGCTAGC CAGTTCGTAA
|
|---|
| Protein sequence | MLSPYGLDII EDCLSCKMRA EHIFCDLPAS ALSAFEAIKY ATAYPKSAVL FVEGQAPRGI
FVLCKGRVKL SICSTDGKTL ILKIAEPGEV LGLSATVSGK TYELTAETID PCQVNFVKRE
DFLRFLKEHA DACFRVAEQL SEKYNTACRE IRSLGLSHSA AEKLAKLLLE WSARAGESNK
SEPRVRLALT HEEIAQMIGT SRETVTRLFA ELKKRQIVLS RGATLVVKNK AALRALASS
|
|---|
| |