More than 300 homologs were found in PanDaTox collection
for query gene Syncc9605_0269 on replicon NC_007516
Organism: Synechococcus sp. CC9605



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  100 
 
 
238 aa  472  1e-132  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  94.76 
 
 
210 aa  397  9.999999999999999e-111  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  86.61 
 
 
222 aa  368  1e-101  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  80.08 
 
 
244 aa  365  1e-100  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  80.5 
 
 
244 aa  365  1e-100  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  79.67 
 
 
244 aa  364  1e-100  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  78.1 
 
 
243 aa  358  3e-98  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  78.1 
 
 
243 aa  358  3e-98  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  76.21 
 
 
244 aa  353  2e-96  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  80.99 
 
 
244 aa  339  2e-92  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  66.82 
 
 
225 aa  301  8.000000000000001e-81  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  66.82 
 
 
225 aa  301  8.000000000000001e-81  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  66.06 
 
 
225 aa  295  5e-79  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  68.06 
 
 
222 aa  292  2e-78  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  70.2 
 
 
223 aa  292  3e-78  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  65.6 
 
 
221 aa  292  3e-78  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  70.2 
 
 
223 aa  291  4e-78  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  68.84 
 
 
223 aa  289  2e-77  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  33.97 
 
 
234 aa  129  6e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  32.46 
 
 
225 aa  108  1e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  31.78 
 
 
232 aa  96.7  3e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  28.5 
 
 
231 aa  95.9  4e-19  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  29.86 
 
 
229 aa  95.5  6e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  33.53 
 
 
211 aa  93.6  2e-18  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  29.17 
 
 
224 aa  93.2  3e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  30.39 
 
 
231 aa  92.8  5e-18  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  30.39 
 
 
231 aa  92.8  5e-18  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  30.21 
 
 
222 aa  90.9  2e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  27.45 
 
 
229 aa  89.7  3e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  27.57 
 
 
226 aa  89.4  5e-17  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.97 
 
 
225 aa  89.4  5e-17  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  29.61 
 
 
217 aa  88.6  9e-17  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  34.32 
 
 
218 aa  88.2  1e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.54 
 
 
236 aa  88.2  1e-16  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  26.42 
 
 
227 aa  87  2e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  25.27 
 
 
254 aa  87  2e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  28.29 
 
 
231 aa  86.7  3e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.56 
 
 
228 aa  86.3  3e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25.37 
 
 
236 aa  86.7  3e-16  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  25 
 
 
236 aa  86.7  3e-16  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  30.99 
 
 
393 aa  86.3  4e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.16 
 
 
227 aa  86.3  4e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  26.51 
 
 
225 aa  86.3  4e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  24.47 
 
 
236 aa  85.5  6e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  31.28 
 
 
237 aa  85.5  7e-16  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  26.77 
 
 
224 aa  85.5  7e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  32.64 
 
 
235 aa  85.5  8e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  31.19 
 
 
240 aa  85.1  9e-16  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  27.42 
 
 
228 aa  85.1  9e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  24.46 
 
 
239 aa  85.1  0.000000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  28.12 
 
 
231 aa  82.8  0.000000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  29.59 
 
 
212 aa  83.2  0.000000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.27 
 
 
242 aa  82.8  0.000000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  28.65 
 
 
228 aa  82.4  0.000000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  25.67 
 
 
230 aa  82  0.000000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  26.49 
 
 
226 aa  82  0.000000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  24.86 
 
 
230 aa  82  0.000000000000007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25.68 
 
 
226 aa  80.5  0.00000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  27.96 
 
 
223 aa  80.1  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  30.73 
 
 
228 aa  80.5  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  28.35 
 
 
202 aa  80.5  0.00000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_012918  GM21_2448  transcriptional regulator, Crp/Fnr family  26.84 
 
 
238 aa  79.7  0.00000000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  30.29 
 
 
208 aa  79.7  0.00000000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  27.94 
 
 
227 aa  79.7  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  28.12 
 
 
228 aa  79.7  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.27 
 
 
229 aa  79  0.00000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  30.61 
 
 
238 aa  79  0.00000000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  26.97 
 
 
247 aa  78.6  0.00000000000007  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  27.08 
 
 
224 aa  79  0.00000000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_011146  Gbem_1802  transcriptional regulator, Crp/Fnr family  26.84 
 
 
238 aa  78.6  0.00000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.08 
 
 
225 aa  78.6  0.00000000000008  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  27.04 
 
 
238 aa  78.6  0.00000000000008  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  27.6 
 
 
224 aa  78.6  0.00000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.26 
 
 
226 aa  78.6  0.00000000000009  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  26.18 
 
 
236 aa  78.2  0.0000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  25.26 
 
 
232 aa  77.8  0.0000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  25.13 
 
 
230 aa  77  0.0000000000002  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  26.51 
 
 
220 aa  77.4  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  26.15 
 
 
225 aa  77.8  0.0000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  28.49 
 
 
281 aa  76.6  0.0000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  26.56 
 
 
225 aa  76.6  0.0000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  26.52 
 
 
267 aa  76.6  0.0000000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  24.6 
 
 
230 aa  76.3  0.0000000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  30.53 
 
 
230 aa  76.3  0.0000000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  26.04 
 
 
232 aa  75.9  0.0000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  22.37 
 
 
240 aa  75.9  0.0000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  28.25 
 
 
236 aa  75.9  0.0000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  24.74 
 
 
225 aa  75.9  0.0000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.69 
 
 
225 aa  75.1  0.0000000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  26.37 
 
 
229 aa  74.3  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  29.13 
 
 
239 aa  74.7  0.000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  25.95 
 
 
226 aa  74.7  0.000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0303  transcriptional regulator, Crp/Fnr family  23.53 
 
 
228 aa  74.3  0.000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  33.73 
 
 
200 aa  73.9  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  27.98 
 
 
226 aa  73.9  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  28.5 
 
 
228 aa  73.9  0.000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  28.42 
 
 
218 aa  74.3  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  27.18 
 
 
226 aa  74.3  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  33.73 
 
 
200 aa  73.9  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  25.39 
 
 
225 aa  73.6  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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