Gene Synpcc7942_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0127 
Symbol 
ID3773467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp126390 
End bp127058 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID637798533 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_399146 
Protein GI81298938 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.867755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.325855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCA ACGAAAATTC TCTGCTGACG ATGTTCCGGG AGTTGGGAAG CGGTAAGCTG 
CCCCTCCAGA TTGAGCAGTT TGAGCGGGGT AAGACCATCT TTTTCCCGGG GGATCCGGCT
GAACGGGTCT ACCTGCTTGT CAAAGGAGCG GTCAAGCTCT CACGAGTCTA TGAGTCGGGC
GAAGAAATTA CGGTGGCCCT GCTGCGTGAG AACAGCGTGT TTGGAGTGCT GTCGCTGCTG
ACAGGTCAGC GCTCCGATCG CTTCTACCAT GCAGTGGCCT TTACGCCGGT TCAACTGTTT
TCGGTGCCGA TCGAGTTCAT GCAGAAGGCG CTGATCGAAC GGCCGGAACT GGCCAACGTG
ATGCTGCAGG GGCTGTCCTC GCGGATTCTG CAGACCGAAA TGATGATCGA GACGCTTGCG
CACCGCGATA TGGGTTCTCG CTTGGTCAGC TTTTTGCTGA TTCTCTGTCG CGACTTTGGC
ATCCCCAGCC CTGATGGCAT CACCATCGAT CTCAAGCTTT CCCACCAGGC AATTGCGGAA
GCGATCGGCT CAACGCGGGT GACAGTGACG CGCTTGCTGG GTGACCTACG GGAATCAAAA
CTGATTGCGA TTCACAAAAA GCGGATCACG GTCTTTAATC CGGTGGCGCT GAGTCAGCAG
TTCAGCTAA
 
Protein sequence
MLANENSLLT MFRELGSGKL PLQIEQFERG KTIFFPGDPA ERVYLLVKGA VKLSRVYESG 
EEITVALLRE NSVFGVLSLL TGQRSDRFYH AVAFTPVQLF SVPIEFMQKA LIERPELANV
MLQGLSSRIL QTEMMIETLA HRDMGSRLVS FLLILCRDFG IPSPDGITID LKLSHQAIAE
AIGSTRVTVT RLLGDLRESK LIAIHKKRIT VFNPVALSQQ FS