Gene Ava_2491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2491 
Symbol 
ID3682744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3085772 
End bp3086953 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content37% 
IMG OID637717834 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_323001 
Protein GI75908705 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.116073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATAG AATTATTTAT CCAACGGGCA GAAGCATTAC ATAAACAACT AGCAGATTTG 
TACCAAACTG CTAGCGTGTT GCCTTGGATT CCGCCAGATT TACTACCACA GGCTTTTAAA
GAGCTTTATA GTAACTCCAA GCTAGTACAG ATGGCGGCAG AAGAACTTTA TCATCAAAAT
GAGGAACTTA TACAAACACG CAGTTTATTA GAAGCAGAAC GCCAACACTA CCATGATTTG
TTTGAGTTTG CACCAGATGG TTATTTAGTA ACTAATGCAG AGGGAATTAT TCAAGAAGCT
AACCTGACTG CGGCAAATTT ATTCAATGCA CCAAAACATA TACTAGTGGA TAGGTCAATA
ATTAATTTTA TTCGCCTCGA AGAAAGGGAA AGCTTTCGCT GTGAACTCAA TCAATTATTC
CAGACCGATA AGGCTAAAAA GTTAATAGTA CGCTTACACC AATTTCATGG TGAGTCTTTT
GATGCGCTTC TAACAATATC TGTAGTTCGT AGCCAAAACG GTAAAATAAA ATCTCTGCAC
TGGTTGTTAA GTCACATTAA TGAAAATCAA CAGCAAAATT TAGGCTTAGT CAATCATGAA
AATTATCTTA GTCAAAACCG TTCAGTATAC GTATATGCTA AAGGAGAGAA TATCCCCCTT
AATCCTTTAG TTATTTGGTA TGTTCGCCAA GGTTTAGTCA AGCTGAGTAC TTTTTGTGAG
ACAGGTGAAG AAGTATTAAT GGGTTTAGTC AAAACACACA TGGTATTTGG CTCTAGTATG
ACTAGTTTAC CTATCTATCA AGCTACGGCT CTTTCTGAGG TGGAATTAGT ATCAATCAAT
TTTGCAGAAA TAGCTGTTTC CCAGATGCTG AGTCATAACC TGCTACCGAA AATAAATCAG
CAATTACAGC AGAAGGAATC TTTTTTAGTT ATTGCTGGAA GACGAAAAGT AGAAGATCGT
CTCTATCATC TATTACAGTT TTTAAAACAA GAAATTGGTG AACCTATAGG AGAAGGGACT
CGCCTAAGTG TACGTTTCAC TCATGAGGAT ATTGCTAGTG CTTGTTGTAC TACTAGAGTG
ACAATTACAC GATTGATGGG TAAGTTACAA CAACAAGGTT TGATTAGTTT TGACTCTAAG
AAACATATGA TTATTAATAA GAGGCTAGAG GATAGGGCAT AA
 
Protein sequence
MNIELFIQRA EALHKQLADL YQTASVLPWI PPDLLPQAFK ELYSNSKLVQ MAAEELYHQN 
EELIQTRSLL EAERQHYHDL FEFAPDGYLV TNAEGIIQEA NLTAANLFNA PKHILVDRSI
INFIRLEERE SFRCELNQLF QTDKAKKLIV RLHQFHGESF DALLTISVVR SQNGKIKSLH
WLLSHINENQ QQNLGLVNHE NYLSQNRSVY VYAKGENIPL NPLVIWYVRQ GLVKLSTFCE
TGEEVLMGLV KTHMVFGSSM TSLPIYQATA LSEVELVSIN FAEIAVSQML SHNLLPKINQ
QLQQKESFLV IAGRRKVEDR LYHLLQFLKQ EIGEPIGEGT RLSVRFTHED IASACCTTRV
TITRLMGKLQ QQGLISFDSK KHMIINKRLE DRA