243 homologs were found in PanDaTox collection
for query gene Synpcc7942_2356 on replicon NC_007604
Organism: Synechococcus elongatus PCC 7942



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  100 
 
 
208 aa  417  1e-116  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  49.76 
 
 
211 aa  200  9.999999999999999e-51  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  45.85 
 
 
218 aa  174  9.999999999999999e-43  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  47.98 
 
 
199 aa  158  6e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  48.31 
 
 
200 aa  155  3e-37  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  48.31 
 
 
200 aa  155  3e-37  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  35.16 
 
 
393 aa  139  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  35.52 
 
 
389 aa  127  1.0000000000000001e-28  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  37.14 
 
 
405 aa  122  3e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_11461  CRP/FNR family transcriptional regulator  35.98 
 
 
210 aa  115  6e-25  Prochlorococcus marinus str. NATL1A  Bacteria  normal  hitchhiker  0.00962041 
 
 
-
 
NC_007335  PMN2A_0435  regulatory protein, Crp  35.45 
 
 
210 aa  111  7.000000000000001e-24  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0427117  n/a   
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  29.61 
 
 
233 aa  104  1e-21  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  39.04 
 
 
225 aa  95.5  5e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  30.2 
 
 
221 aa  94.4  1e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  31.15 
 
 
225 aa  91.7  7e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  31.15 
 
 
225 aa  91.7  7e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  30.6 
 
 
225 aa  90.9  1e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  28.77 
 
 
223 aa  90.5  2e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  33.52 
 
 
197 aa  89.7  3e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  35.88 
 
 
206 aa  89  4e-17  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  29.13 
 
 
223 aa  87.4  1e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  38.36 
 
 
209 aa  87.4  1e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  29.13 
 
 
223 aa  86.7  3e-16  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  30.1 
 
 
222 aa  85.5  5e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  33.33 
 
 
195 aa  84.3  0.000000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  30.86 
 
 
210 aa  83.6  0.000000000000002  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  32 
 
 
222 aa  83.2  0.000000000000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  30.29 
 
 
238 aa  79.7  0.00000000000002  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  36.81 
 
 
256 aa  79.7  0.00000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  30.11 
 
 
243 aa  79.7  0.00000000000003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  30.11 
 
 
243 aa  79.7  0.00000000000003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  30.29 
 
 
244 aa  77.4  0.0000000000001  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  30.29 
 
 
244 aa  77.8  0.0000000000001  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  30.29 
 
 
244 aa  77  0.0000000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  33.95 
 
 
208 aa  75.1  0.0000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  29.71 
 
 
244 aa  74.7  0.0000000000008  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_007413  Ava_1750  Crp/FNR family transcriptional regulator  28.17 
 
 
239 aa  73.9  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.499959  normal 
 
 
-
 
NC_014248  Aazo_0140  putative Crp/Fnr family transcriptional regulator  28.17 
 
 
239 aa  73.9  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.0938698  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.27 
 
 
254 aa  73.2  0.000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  30.18 
 
 
234 aa  71.6  0.000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  31.44 
 
 
242 aa  67.8  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  31.37 
 
 
244 aa  65.9  0.0000000004  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  27.42 
 
 
305 aa  65.5  0.0000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  31.33 
 
 
211 aa  65.5  0.0000000006  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.62 
 
 
225 aa  64.7  0.000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  29.59 
 
 
254 aa  64.3  0.000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  28.87 
 
 
224 aa  64.3  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  28.85 
 
 
226 aa  63.9  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  29.78 
 
 
254 aa  63.5  0.000000002  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  27.01 
 
 
225 aa  62.8  0.000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  26.51 
 
 
225 aa  62.8  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  29.21 
 
 
202 aa  62.4  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  28.99 
 
 
254 aa  62  0.000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.32 
 
 
228 aa  62  0.000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  25.58 
 
 
227 aa  61.6  0.000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  30.73 
 
 
224 aa  60.5  0.00000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  27.41 
 
 
248 aa  60.1  0.00000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  25.41 
 
 
225 aa  60.1  0.00000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  27.41 
 
 
248 aa  60.1  0.00000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  26.47 
 
 
226 aa  60.1  0.00000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_009972  Haur_2113  CRP/FNR family transcriptional regulator  28.19 
 
 
313 aa  60.1  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000556838  n/a   
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  28.73 
 
 
232 aa  59.7  0.00000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  27.64 
 
 
248 aa  59.7  0.00000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.17 
 
 
226 aa  59.7  0.00000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008312  Tery_1663  CRP/FNR family transcriptional regulator  30.11 
 
 
179 aa  59.3  0.00000004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.231367  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  29.45 
 
 
225 aa  58.9  0.00000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  28.57 
 
 
225 aa  57.8  0.0000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  24.86 
 
 
246 aa  57.4  0.0000002  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  29.27 
 
 
224 aa  57.4  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_009483  Gura_2323  CRP/FNR family transcriptional regulator  25.37 
 
 
233 aa  56.2  0.0000003  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00053006  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  26.44 
 
 
219 aa  56.2  0.0000004  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  26.67 
 
 
250 aa  55.5  0.0000005  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.84 
 
 
228 aa  55.8  0.0000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  26.18 
 
 
231 aa  55.5  0.0000005  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  26.67 
 
 
250 aa  55.5  0.0000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.9 
 
 
227 aa  55.5  0.0000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  20 
 
 
226 aa  55.1  0.0000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  25.52 
 
 
250 aa  54.7  0.0000009  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_012880  Dd703_1864  fumarate/nitrate reduction transcriptional regulator  26.02 
 
 
250 aa  54.3  0.000001  Dickeya dadantii Ech703  Bacteria  normal  0.856056  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  34.69 
 
 
235 aa  54.3  0.000001  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  26.7 
 
 
224 aa  54.3  0.000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  29.01 
 
 
220 aa  54.7  0.000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25 
 
 
247 aa  53.5  0.000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  26.73 
 
 
226 aa  53.5  0.000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  26.02 
 
 
250 aa  53.9  0.000002  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
NC_013421  Pecwa_2398  fumarate/nitrate reduction transcriptional regulator  26.02 
 
 
248 aa  53.1  0.000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  26.26 
 
 
254 aa  52.8  0.000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_2105  fumarate/nitrate reduction transcriptional regulator  26.02 
 
 
248 aa  52.8  0.000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0944449  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  26.26 
 
 
250 aa  53.1  0.000003  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  25.64 
 
 
250 aa  53.1  0.000003  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
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