Gene PMN2A_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1612 
Symbol 
ID3607011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp283254 
End bp283985 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID637688491 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_292803 
Protein GI72383448 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTT CGTATCGTGG CTTTACTCGT TTCAACCAAC CCAAAAATAG CCAGATGGTT 
GGTAGCTCCT CAACTCCATT GCCGCCAAAT AAAACTCTCT TAGATGTAAT TAAATCTTTG
GAGGGAGTTT CTACTGAAAC TGTAGATAGA TCAAAAACTA TTTTTTTTCC TGGTGATCCT
GCTGAAAGGG TTTATTTGAT AAGACGTGGT GCAGTGCGAT TGAGCAGAGT CTATGAAACG
GGTGAAGAAA TTACTGTTGC TTTATTGAGA GAAAATAGTC TGTTTGGAGT TTTATCTTTA
TTGACAGGTC ATAGATCAGA TCGTTTTTAT CACGCTGTTG CCTTTACACG TGTGGAACTC
GTTTCTGCTC CAGCCACATC ATTAAGGAAT GCAATTGAGC AAGATGCCTC TGTTGGTTTG
CTCCTTTTAC AAGGTTTATC AAGTCGAGTA CTTCAAACTG AAACAATGAT TGAAACTTTA
ACTCATAGAG ATATGTCTTC TCGTCTCGCA AGTTTTTTAC TTGTTTTATG TAGAGACTTT
GGTGTGCCTG GGGAAAAAGG AGTCACAATT GACTTAAGAC TCTCTCATCA AGCTATTGCT
GAAGCAATAG GTTCAACCAG AGTTACTATT ACACGACTAC TTGGTGAGTT GAAAAGTTCC
TCATTATTGG CAATAGATAG GAAGAAAATA ACCATATTCG ATCCAATAGC GTTAGCAAAA
AGATTTAATT GA
 
Protein sequence
MVTSYRGFTR FNQPKNSQMV GSSSTPLPPN KTLLDVIKSL EGVSTETVDR SKTIFFPGDP 
AERVYLIRRG AVRLSRVYET GEEITVALLR ENSLFGVLSL LTGHRSDRFY HAVAFTRVEL
VSAPATSLRN AIEQDASVGL LLLQGLSSRV LQTETMIETL THRDMSSRLA SFLLVLCRDF
GVPGEKGVTI DLRLSHQAIA EAIGSTRVTI TRLLGELKSS SLLAIDRKKI TIFDPIALAK
RFN