Gene Dtox_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2928 
Symbol 
ID8429918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3106903 
End bp3107601 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content39% 
IMG OID645035184 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_003192307 
Protein GI258516085 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.39759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA CTAAGAATAC AGAATTAATT GAAAACAATA ACAATATGGA CACATTAGTT 
TTAGAGGAAG AAGAAACTAA GGCTATAATG CAAACCGGTC TAAAAATAAA TTACCCCAAA
GGCCATGTGA TTTTTTCCGC CGGTGATAAA GCTAACCAAA TATATTATAT CGAAAGCGGT
TATGTAAAAA TATACAGGTT AAATGCTGAC GGCAGAAAGG TTAATGTAGG CAGTTTACGT
AACCCGGGAG AAATTATGGG CATAGCAGAG ACTCTTTATG AAACTGAAAG AACCTGTTTT
GCCGGTACTA TGACTGATGC AGTATTATAT GTGGTTACTT ACAAGGACTT TCTAAAGCTT
ATGACTGATC ATCATTATCT CTCTATTAAG GTGGCCAAAC TCCTGGGAAC TCGTATGCGT
GAGGCAGAAT CAATTATTCA CGAACTAGTC TGCTGGCAGG TACCGGGCCG GCTGGCTCTC
ATGCTGCTGA AAATAGGCGA GCGCTGCGGT ATCAACACAG AGAACGGAAC ACTGATTAAG
CTGCGCCTAA CTCATGAGGA AATAGCCAAT ATGATTGGTA CGTCTCGACA AACAGTAACT
TCTTTGATTA ATACATTCAA ACAGGAACAG AGTATTACTG TAGAGGGTAA GGATATTAAA
ATTGTTAACC CAAACAAATT GGCCAATTGG GTAGTATAA
 
Protein sequence
MKDTKNTELI ENNNNMDTLV LEEEETKAIM QTGLKINYPK GHVIFSAGDK ANQIYYIESG 
YVKIYRLNAD GRKVNVGSLR NPGEIMGIAE TLYETERTCF AGTMTDAVLY VVTYKDFLKL
MTDHHYLSIK VAKLLGTRMR EAESIIHELV CWQVPGRLAL MLLKIGERCG INTENGTLIK
LRLTHEEIAN MIGTSRQTVT SLINTFKQEQ SITVEGKDIK IVNPNKLANW VV