Gene Rcas_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0291 
Symbol 
ID5537753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp359780 
End bp360463 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content61% 
IMG OID640892455 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001430442 
Protein GI156740313 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.277011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGC ATGATCCGCC ACCGCCGGTC GATGTCATTA CCGATGCGGC GCTCTTTCCG 
CAGTTGATGT CGGCGCTGCG CGACATCCAC GGTGAGATTG CGGCAGTTCA GCGACCCGCC
GGGTACGTGT TCTACGGTCT GGAAGATTCA GGTGCAGAGA TGTATCTGCT CTACCGGGGT
CGGGTTCGGC TCTACACTAT CTCGCCCGAA GGCCGCGCGC TCACCATCCT GATCCTCGAT
GCACCCGCAG TCTTCGGTGA AGTGACGCTT GCGGAAGGAG CGTACCACGA CAGTTATGCG
ATCAGCGTCA CACCATGCAC CGTCGGCGCC GTTCATCGTG AGACGCTGCG CCGGGCGTTG
CGCAATCAAC CATCGCTTGC CCTGCGGTTT ATGACAGTCA TGGGCCAGCG GTTGCGCGCC
ATCGAGCGAA AATTGTCCGA CATTGCCTTC AAGAGCGTGC CACAACGGTT GGCGGCGGCG
TTGCTCGGAT TGTGGACCGA ACAGCGCGAT ACGCCGCCAA CTGTGCGCTC GACGCATCAA
CAACTCGCCG AGTTGATCGG ATCACACCGC GAAACGGTCA CCAAAGCGCT CGGCGATTTT
CGCGCCGCCG GATTGATCCG GGTCGATGAC GACGCCATCC ATTTGATCGA CCTGGTGCGC
CTCACCCATC TGGCATATTC GTGA
 
Protein sequence
MTTHDPPPPV DVITDAALFP QLMSALRDIH GEIAAVQRPA GYVFYGLEDS GAEMYLLYRG 
RVRLYTISPE GRALTILILD APAVFGEVTL AEGAYHDSYA ISVTPCTVGA VHRETLRRAL
RNQPSLALRF MTVMGQRLRA IERKLSDIAF KSVPQRLAAA LLGLWTEQRD TPPTVRSTHQ
QLAELIGSHR ETVTKALGDF RAAGLIRVDD DAIHLIDLVR LTHLAYS