More than 300 homologs were found in PanDaTox collection
for query gene Cagg_1896 on replicon NC_011831
Organism: Chloroflexus aggregans DSM 9485



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  100 
 
 
218 aa  434  1e-121  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3679  Crp/FNR family transcriptional regulator  52.29 
 
 
216 aa  216  2e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.170413  normal  0.193267 
 
 
-
 
NC_009523  RoseRS_4027  cyclic nucleotide-binding protein  57.29 
 
 
216 aa  209  3e-53  Roseiflexus sp. RS-1  Bacteria  normal  0.357709  normal 
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  37.64 
 
 
227 aa  110  2.0000000000000002e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  39.25 
 
 
222 aa  109  3e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  37.77 
 
 
228 aa  104  8e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  32.26 
 
 
267 aa  103  1e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  27.23 
 
 
229 aa  87  2e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  29.77 
 
 
222 aa  86.3  4e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  30.77 
 
 
235 aa  85.9  4e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  27.32 
 
 
226 aa  84.3  0.000000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  29.05 
 
 
234 aa  84.3  0.000000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  26.56 
 
 
226 aa  84.7  0.000000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  25.89 
 
 
231 aa  84  0.000000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  27.72 
 
 
232 aa  83.2  0.000000000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  29.74 
 
 
243 aa  82.4  0.000000000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  30.26 
 
 
223 aa  80.9  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  30.65 
 
 
226 aa  79.3  0.00000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  26.09 
 
 
239 aa  79.3  0.00000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  24.75 
 
 
352 aa  79.3  0.00000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  30.05 
 
 
223 aa  79  0.00000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  27.14 
 
 
229 aa  79  0.00000000000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  29.53 
 
 
225 aa  78.6  0.00000000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  28.42 
 
 
244 aa  78.6  0.00000000000007  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  24.48 
 
 
225 aa  77.8  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  29.44 
 
 
221 aa  78.2  0.0000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  25.98 
 
 
227 aa  77  0.0000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_009485  BBta_6723  putative cyclic-AMP receptor-like protein  27.43 
 
 
235 aa  77  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.823634  normal 
 
 
-
 
NC_013037  Dfer_5316  transcriptional regulator, Crp/Fnr family  23.74 
 
 
354 aa  77.4  0.0000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.100222 
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  28.42 
 
 
244 aa  77  0.0000000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  28.42 
 
 
244 aa  77.4  0.0000000000002  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.44 
 
 
225 aa  76.3  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  29.23 
 
 
225 aa  76.6  0.0000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  29.23 
 
 
225 aa  76.6  0.0000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  27.89 
 
 
244 aa  75.9  0.0000000000004  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  25.52 
 
 
227 aa  75.9  0.0000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  25.39 
 
 
241 aa  75.5  0.0000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  28.65 
 
 
210 aa  75.1  0.0000000000007  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  25.49 
 
 
228 aa  75.1  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  29.53 
 
 
223 aa  75.1  0.0000000000008  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  28.42 
 
 
238 aa  74.3  0.000000000001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0884  Crp/Fnr family transcriptional regulator  31.41 
 
 
214 aa  74.3  0.000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.163926  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  24.51 
 
 
230 aa  73.9  0.000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  29.69 
 
 
240 aa  73.6  0.000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.3 
 
 
237 aa  72.4  0.000000000004  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  28.87 
 
 
218 aa  72.8  0.000000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_008009  Acid345_3455  Crp/FNR family transcriptional regulator  25.65 
 
 
237 aa  72.8  0.000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.063385 
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  28.87 
 
 
218 aa  72.8  0.000000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  30.23 
 
 
228 aa  72.4  0.000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  27.75 
 
 
222 aa  71.6  0.000000000009  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  25.79 
 
 
223 aa  71.2  0.00000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2833  transcriptional regulator, Crp/Fnr family  31.25 
 
 
213 aa  70.5  0.00000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0320601  normal  0.661336 
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  30.48 
 
 
230 aa  70.1  0.00000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  21.95 
 
 
227 aa  70.1  0.00000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  25 
 
 
229 aa  69.7  0.00000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  26.88 
 
 
217 aa  70.1  0.00000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  26.87 
 
 
254 aa  70.1  0.00000000003  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  32.24 
 
 
238 aa  69.7  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  28.72 
 
 
234 aa  69.3  0.00000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  23.65 
 
 
229 aa  68.9  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  26.11 
 
 
224 aa  69.3  0.00000000005  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  27.42 
 
 
222 aa  68.9  0.00000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  25 
 
 
228 aa  68.6  0.00000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  23.83 
 
 
227 aa  67.8  0.0000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  27.13 
 
 
225 aa  67.8  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  23.83 
 
 
227 aa  67.4  0.0000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  25.52 
 
 
227 aa  67.8  0.0000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_013456  VEA_003082  transcriptional regulator Crp/Fnr family  26.87 
 
 
231 aa  67.8  0.0000000001  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00863529  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  24.15 
 
 
226 aa  67  0.0000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  28.49 
 
 
243 aa  67  0.0000000002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  24.77 
 
 
229 aa  67.4  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2027  transcriptional regulator, Crp/Fnr family  26.86 
 
 
226 aa  67.4  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  23.19 
 
 
221 aa  67  0.0000000002  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  24.59 
 
 
350 aa  67  0.0000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  26.86 
 
 
212 aa  67.4  0.0000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  28.02 
 
 
224 aa  66.2  0.0000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  28.49 
 
 
243 aa  66.6  0.0000000003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  30.57 
 
 
232 aa  66.2  0.0000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  21.67 
 
 
226 aa  66.2  0.0000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  28.79 
 
 
225 aa  65.9  0.0000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  20.62 
 
 
355 aa  65.9  0.0000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  28.12 
 
 
239 aa  65.1  0.0000000007  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  28.12 
 
 
224 aa  65.1  0.0000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  24.06 
 
 
254 aa  65.1  0.0000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  24.34 
 
 
224 aa  64.3  0.000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  25.93 
 
 
224 aa  64.3  0.000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.67 
 
 
227 aa  64.7  0.000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  31.71 
 
 
202 aa  64.7  0.000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  25.51 
 
 
236 aa  64.7  0.000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  26.16 
 
 
251 aa  64.3  0.000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  24.21 
 
 
352 aa  63.9  0.000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  25.58 
 
 
248 aa  63.5  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  25 
 
 
226 aa  63.5  0.000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  25.87 
 
 
254 aa  63.9  0.000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  25.98 
 
 
219 aa  63.5  0.000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  22.43 
 
 
243 aa  63.9  0.000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  30.16 
 
 
224 aa  63.5  0.000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  26.63 
 
 
226 aa  63.2  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  25.91 
 
 
228 aa  62.8  0.000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  27.37 
 
 
228 aa  62.8  0.000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>