More than 300 homologs were found in PanDaTox collection
for query gene Mrub_0884 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_0884  Crp/Fnr family transcriptional regulator  100 
 
 
214 aa  426  1e-118  Meiothermus ruber DSM 1279  Bacteria  normal  0.163926  normal 
 
 
-
 
NC_014212  Mesil_2833  transcriptional regulator, Crp/Fnr family  80.28 
 
 
213 aa  349  2e-95  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0320601  normal  0.661336 
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  43.14 
 
 
230 aa  137  1e-31  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  33.87 
 
 
267 aa  96.7  2e-19  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  33.96 
 
 
225 aa  96.3  3e-19  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_011831  Cagg_0349  transcriptional regulator, Crp/Fnr family  30.62 
 
 
222 aa  95.9  4e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00000192919 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  32.11 
 
 
225 aa  94.7  8e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  30.81 
 
 
231 aa  92  6e-18  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  29.47 
 
 
243 aa  90.9  1e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  34.39 
 
 
225 aa  89.4  4e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  34.39 
 
 
225 aa  88.6  7e-17  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  33 
 
 
225 aa  87.4  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  31.39 
 
 
234 aa  87.4  2e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  33.78 
 
 
234 aa  87.4  2e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  29.95 
 
 
236 aa  86.7  3e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.88 
 
 
225 aa  85.9  4e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  33.74 
 
 
227 aa  85.9  4e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  32.26 
 
 
227 aa  85.5  5e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  29.38 
 
 
235 aa  85.5  6e-16  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  31.9 
 
 
224 aa  83.6  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  31.6 
 
 
218 aa  84  0.000000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.24 
 
 
225 aa  84  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  31.46 
 
 
231 aa  83.2  0.000000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  35.14 
 
 
250 aa  82.8  0.000000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  33.33 
 
 
225 aa  82.8  0.000000000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  27.27 
 
 
226 aa  82.8  0.000000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  31.43 
 
 
224 aa  82.4  0.000000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  33.51 
 
 
225 aa  82  0.000000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  30.66 
 
 
232 aa  81.6  0.000000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  31.37 
 
 
242 aa  81.6  0.000000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011830  Dhaf_0880  transcriptional regulator, Crp/Fnr family  26.96 
 
 
219 aa  81.6  0.000000000000009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.812688  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  32.08 
 
 
229 aa  81.3  0.00000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  33.14 
 
 
228 aa  80.9  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  27.81 
 
 
243 aa  80.9  0.00000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  32.98 
 
 
228 aa  80.1  0.00000000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  32.32 
 
 
232 aa  80.5  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  27.84 
 
 
219 aa  80.1  0.00000000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  27.06 
 
 
230 aa  79  0.00000000000004  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  31.4 
 
 
251 aa  79.3  0.00000000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  29.9 
 
 
225 aa  79  0.00000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  28.78 
 
 
249 aa  79  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  30.98 
 
 
229 aa  78.6  0.00000000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  34.52 
 
 
226 aa  78.6  0.00000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  32.93 
 
 
228 aa  78.2  0.00000000000008  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  33.33 
 
 
226 aa  78.2  0.0000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.28 
 
 
220 aa  77  0.0000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  31.16 
 
 
224 aa  77.4  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  31.77 
 
 
223 aa  77  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  33.16 
 
 
224 aa  77  0.0000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  31.02 
 
 
227 aa  77  0.0000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  31.44 
 
 
223 aa  76.3  0.0000000000003  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  32.68 
 
 
224 aa  76.6  0.0000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.24 
 
 
226 aa  75.9  0.0000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  31.41 
 
 
223 aa  75.9  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  28.04 
 
 
352 aa  75.9  0.0000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  29.85 
 
 
234 aa  75.9  0.0000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  30.37 
 
 
228 aa  75.9  0.0000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  31.25 
 
 
228 aa  75.5  0.0000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  29.78 
 
 
228 aa  75.5  0.0000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  31.32 
 
 
225 aa  75.1  0.0000000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  29.38 
 
 
221 aa  75.1  0.0000000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  28.04 
 
 
243 aa  74.7  0.0000000000009  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.81 
 
 
229 aa  74.7  0.0000000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  32.28 
 
 
228 aa  74.3  0.000000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_009767  Rcas_3897  Crp/FNR family transcriptional regulator  29.23 
 
 
227 aa  74.3  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.280734  normal  0.887061 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.77 
 
 
225 aa  74.7  0.000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  31.41 
 
 
218 aa  74.3  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  30.37 
 
 
225 aa  73.6  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  28.06 
 
 
350 aa  73.6  0.000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  30.81 
 
 
254 aa  73.9  0.000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_013946  Mrub_0375  Crp/Fnr family transcriptional regulator  29.41 
 
 
196 aa  73.6  0.000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.887845  normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  28.65 
 
 
240 aa  73.6  0.000000000002  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  29.35 
 
 
227 aa  73.6  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  30.37 
 
 
225 aa  73.6  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  26.74 
 
 
352 aa  72.8  0.000000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  25.46 
 
 
231 aa  73.2  0.000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  28.73 
 
 
229 aa  73.2  0.000000000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  24.61 
 
 
232 aa  73.2  0.000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0139  cAMP-regulatory protein  25.93 
 
 
214 aa  73.2  0.000000000003  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  33.54 
 
 
228 aa  72.8  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  31.98 
 
 
225 aa  72.8  0.000000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  28.09 
 
 
227 aa  72.8  0.000000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  32.81 
 
 
243 aa  72.8  0.000000000004  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  32.2 
 
 
226 aa  72.4  0.000000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  32.81 
 
 
243 aa  72.8  0.000000000004  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  29.23 
 
 
348 aa  72.8  0.000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  30.37 
 
 
225 aa  72.8  0.000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  29.74 
 
 
229 aa  72  0.000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  25.41 
 
 
233 aa  72  0.000000000006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1482  transcriptional regulator, Crp/Fnr family  32.45 
 
 
196 aa  72  0.000000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.053801  hitchhiker  0.0000318932 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  27.87 
 
 
235 aa  71.6  0.000000000007  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  27.54 
 
 
250 aa  71.6  0.000000000009  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_009801  EcE24377A_3827  cAMP-regulatory protein  24.47 
 
 
210 aa  71.6  0.000000000009  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  32.78 
 
 
230 aa  71.2  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  33.03 
 
 
226 aa  71.2  0.00000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  30.37 
 
 
222 aa  70.9  0.00000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_009457  VC0395_A2191  cAMP-regulatory protein  24.47 
 
 
210 aa  70.9  0.00000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0293  cAMP-regulatory protein  23.94 
 
 
210 aa  70.9  0.00000000001  Dickeya zeae Ech1591  Bacteria  normal  0.160804  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  27.87 
 
 
229 aa  71.2  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03160  hypothetical protein  23.94 
 
 
210 aa  70.1  0.00000000002  Escherichia coli BL21  Bacteria  normal  0.0202429  n/a   
 
 
-
 
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