Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003082 |
Symbol | |
ID | 8556811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1645609 |
End bp | 1646304 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646406173 |
Product | transcriptional regulator Crp/Fnr family |
Protein accession | YP_003285707 |
Protein GI | 262393853 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00863529 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAG TCAAAGCATT ATTAGCCAAA TGTCCTGTAT TATCAGGGCT GCCCGAGAAA GGACTTAGTG AAGCAGCACA AATAGCTAAA GTTCGCTGTT TCGACGAAAA AGCACTGATT TGCAATAAAG GGGAACCTCA ATCTTCTCTT ATGGTCATTG CACAGGGTGC CGTACGAATT AATTCGATGA GTTCAAAAGG CAAAGAAGTC ACATTAATGA TTTTCGAGGC AGGAGGCTGG TTTGGAGACA ATGTTTTTTC TCCCGGCATG CCCCGTATTT TTGGCGCAAC CGCGCATTCG GGCGTGACCT TACTGGAACT ACCTGGTGAT AAGTTTCGCC AATTACTCGC CAAATATCCT CAAAGTTACC CTACGATTCT CGACTTACTT AGCCGCCGCT TATGGTCTGC AATTTCTGTT ATCGAAGATG ATGCGATTAG AGGAATCGAA GAGCGGATTG CAAGAAGGTT GCTGTTGCTT GCTGAATACC AACACAACCA AGCTATCAAT ACTCAGCCGT GTGTCGTGAG AGTGACTAGA GAGCATATCG CCAACATGAT GGGGCTAACT CGTCAAAGTG TTCATAAAGT ACTAAAAAAC TTAGAGAGTA TTGGGATGCT AGAACTGAAA TATGGTTCAG TGACCATTAC CAATCCAAAA CGCTTAGAAG CGCACATAAA ACAACTCGAA CAATAG
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Protein sequence | MEEVKALLAK CPVLSGLPEK GLSEAAQIAK VRCFDEKALI CNKGEPQSSL MVIAQGAVRI NSMSSKGKEV TLMIFEAGGW FGDNVFSPGM PRIFGATAHS GVTLLELPGD KFRQLLAKYP QSYPTILDLL SRRLWSAISV IEDDAIRGIE ERIARRLLLL AEYQHNQAIN TQPCVVRVTR EHIANMMGLT RQSVHKVLKN LESIGMLELK YGSVTITNPK RLEAHIKQLE Q
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