More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_1610 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  100 
 
 
218 aa  424  1e-118  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  100 
 
 
218 aa  424  1e-118  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  88.64 
 
 
240 aa  380  1e-105  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  48.94 
 
 
224 aa  177  1e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  43.38 
 
 
225 aa  169  2e-41  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  47.09 
 
 
216 aa  169  4e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  43.68 
 
 
223 aa  161  6e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  40.78 
 
 
228 aa  145  4.0000000000000006e-34  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  37.82 
 
 
220 aa  145  4.0000000000000006e-34  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  37.82 
 
 
231 aa  145  4.0000000000000006e-34  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  37.8 
 
 
221 aa  143  2e-33  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  45.51 
 
 
230 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  40.38 
 
 
222 aa  134  9.999999999999999e-31  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  44.32 
 
 
223 aa  132  3e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  41.08 
 
 
213 aa  132  3e-30  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  42.7 
 
 
224 aa  132  5e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  46.07 
 
 
224 aa  127  1.0000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  36.16 
 
 
220 aa  124  1e-27  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  40.76 
 
 
247 aa  117  9.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  39.71 
 
 
224 aa  115  5e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  35.29 
 
 
229 aa  112  4.0000000000000004e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  33.88 
 
 
222 aa  103  2e-21  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  29.78 
 
 
201 aa  101  7e-21  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  26.63 
 
 
208 aa  100  1e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  32.62 
 
 
229 aa  97.8  1e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  25.93 
 
 
201 aa  94.7  1e-18  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  28.22 
 
 
243 aa  94  2e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  33.33 
 
 
222 aa  92.8  4e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  28.34 
 
 
235 aa  92  5e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  31.18 
 
 
227 aa  89.7  3e-17  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  27.27 
 
 
283 aa  87.8  1e-16  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  27.6 
 
 
236 aa  87.4  1e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  28.5 
 
 
234 aa  87.8  1e-16  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  32.68 
 
 
223 aa  86.3  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  26.67 
 
 
224 aa  86.7  3e-16  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  28.24 
 
 
226 aa  85.1  8e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  24.31 
 
 
208 aa  84  0.000000000000001  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  29.47 
 
 
228 aa  84.3  0.000000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.99 
 
 
241 aa  83.2  0.000000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  30.29 
 
 
225 aa  81.3  0.00000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  31.1 
 
 
226 aa  80.5  0.00000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.93 
 
 
229 aa  80.5  0.00000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  32.07 
 
 
222 aa  79.7  0.00000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  27.15 
 
 
229 aa  79.7  0.00000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  23.89 
 
 
211 aa  79.3  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  26.03 
 
 
230 aa  79.3  0.00000000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  27.69 
 
 
229 aa  79.3  0.00000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  30.62 
 
 
226 aa  78.2  0.00000000000009  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_007498  Pcar_1491  Crp/FNR family transcriptional regulator  27.44 
 
 
224 aa  75.9  0.0000000000004  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000413534  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  30.97 
 
 
224 aa  75.9  0.0000000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  23.16 
 
 
210 aa  75.9  0.0000000000005  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2528  putative transcriptional regulator  28.65 
 
 
251 aa  75.9  0.0000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.244849 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  30.19 
 
 
224 aa  75.1  0.0000000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  23.04 
 
 
212 aa  74.7  0.0000000000009  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  28.71 
 
 
236 aa  74.3  0.000000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  28.86 
 
 
224 aa  74.3  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  27.07 
 
 
231 aa  74.3  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  29.65 
 
 
254 aa  74.7  0.000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  30.85 
 
 
225 aa  73.9  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  32.2 
 
 
228 aa  73.9  0.000000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  29.49 
 
 
240 aa  73.9  0.000000000002  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  26.84 
 
 
225 aa  73.9  0.000000000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  30.2 
 
 
225 aa  73.9  0.000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  23.3 
 
 
212 aa  73.2  0.000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  30.48 
 
 
228 aa  73.2  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.05 
 
 
227 aa  72.8  0.000000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  34.13 
 
 
230 aa  72.4  0.000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  30.77 
 
 
228 aa  72.8  0.000000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  29.63 
 
 
224 aa  72.8  0.000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  28.87 
 
 
218 aa  72.8  0.000000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  31.53 
 
 
225 aa  72.8  0.000000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  26.58 
 
 
232 aa  72.4  0.000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.05 
 
 
225 aa  72  0.000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  24.88 
 
 
236 aa  72  0.000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  24.62 
 
 
228 aa  72  0.000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  26.53 
 
 
234 aa  72  0.000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  26.53 
 
 
229 aa  72  0.000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  28.02 
 
 
230 aa  71.6  0.000000000009  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  26.46 
 
 
236 aa  71.6  0.000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  29.59 
 
 
231 aa  71.2  0.00000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  30.35 
 
 
228 aa  71.2  0.00000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007651  BTH_I0747  transcriptional regulator, putative  29.9 
 
 
266 aa  71.2  0.00000000001  Burkholderia thailandensis E264  Bacteria  normal  0.59923  n/a   
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  28.44 
 
 
254 aa  70.5  0.00000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.63 
 
 
226 aa  70.5  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  27.7 
 
 
233 aa  70.1  0.00000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  27.7 
 
 
233 aa  70.1  0.00000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  28.44 
 
 
254 aa  70.5  0.00000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  25.81 
 
 
229 aa  69.7  0.00000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0780  Crp/FNR family transcriptional regulator  31.48 
 
 
231 aa  69.7  0.00000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.390237  normal 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  29 
 
 
225 aa  69.7  0.00000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008060  Bcen_1929  Crp/FNR family transcriptional regulator  28.83 
 
 
235 aa  69.3  0.00000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.589711  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  25.81 
 
 
246 aa  69.3  0.00000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_008542  Bcen2424_2541  Crp/FNR family transcriptional regulator  28.83 
 
 
235 aa  69.3  0.00000000004  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000812643  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  29.28 
 
 
227 aa  69.3  0.00000000004  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  26.56 
 
 
222 aa  68.9  0.00000000005  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  26.7 
 
 
230 aa  69.3  0.00000000005  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  24.1 
 
 
227 aa  68.9  0.00000000006  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  24.1 
 
 
227 aa  68.6  0.00000000007  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  30.49 
 
 
235 aa  68.6  0.00000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  24.21 
 
 
218 aa  68.2  0.00000000008  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
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