More than 300 homologs were found in PanDaTox collection
for query gene P9303_24561 on replicon NC_008820
Organism: Prochlorococcus marinus str. MIT 9303



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  100 
 
 
222 aa  446  1.0000000000000001e-124  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  86.61 
 
 
238 aa  388  1e-107  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  90.95 
 
 
210 aa  382  1e-105  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  87.96 
 
 
244 aa  365  1e-100  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  87.5 
 
 
244 aa  365  1e-100  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  87.5 
 
 
244 aa  362  3e-99  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  82.81 
 
 
243 aa  360  1e-98  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  82.81 
 
 
243 aa  360  1e-98  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  85.19 
 
 
244 aa  352  2e-96  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  86.88 
 
 
244 aa  343  8.999999999999999e-94  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  67.27 
 
 
225 aa  305  4.0000000000000004e-82  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  67.27 
 
 
225 aa  305  4.0000000000000004e-82  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  67.59 
 
 
225 aa  300  9e-81  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  66.36 
 
 
221 aa  297  7e-80  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  65.9 
 
 
223 aa  297  9e-80  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  65.9 
 
 
223 aa  296  1e-79  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  65.75 
 
 
222 aa  295  5e-79  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  68.34 
 
 
223 aa  294  6e-79  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  33.97 
 
 
234 aa  125  4.0000000000000003e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  31.18 
 
 
225 aa  108  8.000000000000001e-23  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  32.45 
 
 
232 aa  101  1e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  33.13 
 
 
211 aa  99  5e-20  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  28.86 
 
 
231 aa  98.6  7e-20  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  32.72 
 
 
218 aa  92.4  4e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  25.97 
 
 
254 aa  90.9  1e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  27.96 
 
 
228 aa  90.9  1e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.79 
 
 
225 aa  90.5  2e-17  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  28.8 
 
 
229 aa  89.7  3e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.75 
 
 
224 aa  89.7  3e-17  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  28.64 
 
 
231 aa  87.8  1e-16  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  26.79 
 
 
242 aa  87.8  1e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  28.64 
 
 
231 aa  87.8  1e-16  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  28.11 
 
 
224 aa  87.8  1e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  31.77 
 
 
235 aa  87  2e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  26.96 
 
 
229 aa  86.7  3e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  30.06 
 
 
393 aa  85.9  4e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  32 
 
 
208 aa  86.3  4e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  26.49 
 
 
226 aa  85.5  5e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  25.71 
 
 
227 aa  85.9  5e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  27.67 
 
 
227 aa  85.5  6e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  27.32 
 
 
236 aa  85.5  6e-16  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25.37 
 
 
236 aa  85.1  7e-16  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  25.23 
 
 
225 aa  84.7  9e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  30.77 
 
 
212 aa  84.3  0.000000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.04 
 
 
228 aa  84.7  0.000000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.93 
 
 
226 aa  84.7  0.000000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  28.85 
 
 
228 aa  84.7  0.000000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  30.73 
 
 
237 aa  84.7  0.000000000000001  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  24.86 
 
 
230 aa  84  0.000000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  24.29 
 
 
239 aa  83.6  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  27.6 
 
 
222 aa  84  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  27.44 
 
 
230 aa  83.6  0.000000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  27.72 
 
 
231 aa  83.2  0.000000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  25.95 
 
 
225 aa  83.2  0.000000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  25.68 
 
 
226 aa  82.8  0.000000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  27.45 
 
 
227 aa  82.8  0.000000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  29.47 
 
 
240 aa  82.4  0.000000000000005  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  27.03 
 
 
226 aa  81.6  0.000000000000008  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  32.51 
 
 
305 aa  80.9  0.00000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  23.94 
 
 
236 aa  81.3  0.00000000000001  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  23.4 
 
 
236 aa  80.1  0.00000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  28.57 
 
 
202 aa  80.1  0.00000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  27.57 
 
 
228 aa  79.3  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  30.89 
 
 
230 aa  79.3  0.00000000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  27.08 
 
 
224 aa  79.3  0.00000000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  29.9 
 
 
228 aa  79.3  0.00000000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  27.08 
 
 
231 aa  79  0.00000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  27.27 
 
 
217 aa  79  0.00000000000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  26.2 
 
 
223 aa  79  0.00000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  27.08 
 
 
224 aa  79  0.00000000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  33.14 
 
 
199 aa  78.6  0.00000000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  25.64 
 
 
225 aa  78.6  0.00000000000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  25.41 
 
 
226 aa  78.6  0.00000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  30.77 
 
 
238 aa  78.6  0.00000000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  25.67 
 
 
230 aa  78.6  0.00000000000008  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.03 
 
 
225 aa  78.2  0.00000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  25.64 
 
 
225 aa  78.2  0.00000000000009  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  25.35 
 
 
230 aa  78.2  0.00000000000009  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  22.52 
 
 
240 aa  77.8  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  25.64 
 
 
236 aa  76.6  0.0000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  27.75 
 
 
218 aa  76.6  0.0000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25.84 
 
 
247 aa  75.9  0.0000000000004  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  25.35 
 
 
230 aa  75.9  0.0000000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  26.36 
 
 
220 aa  75.5  0.0000000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  26.67 
 
 
238 aa  75.5  0.0000000000005  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  25.13 
 
 
232 aa  75.5  0.0000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  28.33 
 
 
281 aa  75.5  0.0000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  25.13 
 
 
225 aa  75.5  0.0000000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  28.92 
 
 
389 aa  75.5  0.0000000000006  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  29.28 
 
 
251 aa  74.7  0.0000000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  25.79 
 
 
218 aa  75.1  0.0000000000009  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  24.88 
 
 
230 aa  74.3  0.000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  33.13 
 
 
200 aa  74.7  0.000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  24.6 
 
 
226 aa  74.3  0.000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  26.03 
 
 
229 aa  74.7  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  33.13 
 
 
200 aa  74.7  0.000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  26.88 
 
 
226 aa  74.7  0.000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  23.71 
 
 
225 aa  74.3  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  27.46 
 
 
224 aa  74.3  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  24.88 
 
 
230 aa  73.9  0.000000000002  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
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