Gene Ava_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3283 
Symbol 
ID3680314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4096154 
End bp4096825 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID637718634 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_323786 
Protein GI75909490 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGA CACAAGATAA GGCCCTAGCA AATGTTTTTC GTCAGATGGC AACCGGAGCT 
TTTCCTCCTG TTGTCGAAAC GTTTGAACGC AATAAAACGA TCTTTTTTCC TGGCGATCCT
GCCGAACGAG TCTACTTTCT TTTGAAAGGG GCTGTGAAAC TTTCCAGGGT GTACGAGGCA
GGAGAAGAGA TTACAGTAGC ACTACTACGG GAAAATAGCG TTTTTGGTGT CCTGTCTTTG
TTGACAGGAA ACAAGTCGGA TAGGTTTTAC CATGCGGTGG CATTTACTCC AGTAGAATTG
CTTTCTGCAC CAATTGAACA AGTTGAGCAA GCACTTAAGG AAAATCCAGA GTTATCGATG
TTGATGCTGC GGGGTCTGTC TTCGCGGATT CTGCAAACAG AGATGATGAT TGAGACCTTA
GCGCACCGGG ATATGGGGTC GAGATTGGTG AGTTTTCTGT TAATTCTCTG TCGTGATTTT
GGTGTTCCTT GTGCAGATGG AATCACTATT GATTTAAAGT TATCTCATCA GGCGATCGCC
GAAGCAATTG GCTCTACTCG CGTTACTGTT ACTAGGCTAC TAGGGGATCT GCGGGAGAAA
AAGATGATTT CCATCCACAA AAAGAAGATT ACTGTGCATA AACCTGTGAC TCTCAGCAGA
CAGTTCACTT AA
 
Protein sequence
MIVTQDKALA NVFRQMATGA FPPVVETFER NKTIFFPGDP AERVYFLLKG AVKLSRVYEA 
GEEITVALLR ENSVFGVLSL LTGNKSDRFY HAVAFTPVEL LSAPIEQVEQ ALKENPELSM
LMLRGLSSRI LQTEMMIETL AHRDMGSRLV SFLLILCRDF GVPCADGITI DLKLSHQAIA
EAIGSTRVTV TRLLGDLREK KMISIHKKKI TVHKPVTLSR QFT