Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_2023 |
Symbol | |
ID | 4243627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 3150496 |
End bp | 3151161 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638107140 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_721743 |
Protein GI | 113475682 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0496812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCATG ATAGACCGCT AGCATCTGTT TTCCGTAATA TATCTGGTGG CTCATATCCA CCAGTGATAG AAACTTTTGA GCGGAGCAAG ACAATATTTT TTCCAGGAGA TCCTGCCGAG CGTGTCTACG TCTTAATAAA AGGCGCAGTA AAGCTATCTA GGGTTTATGA AGCAGGAGAC GAAATTACAG TAGCCTTACT TAGGGAGAAT AGTGTATTTG GTGTGCTATC TCTAATAACA GGCCATAAGT CAGATCGTTT CTACCATGCA GTGGCATTTA CTCCAGTAGA GTTAATATCA GTGCCAATTG ACCAAGTAGA AAAAGCTCTA AGAGAAGATC CAGAACTGTC AGTTATTCTA TTGCGTGGAC TATCATCCCG AATTTTACAG ACAGAAATGA TGATTGAAAC CTTGGCACAC CGAGATATGG GTTCTAGACT GGTTAGCTTT TTGTTAATCC TTTGTCGAGA TTTTGGAGTT CCTAGAGATG ATGGGATTAT GATTGACTTG AAATTATCTC ACCAAGCAAT TGCAGAAGCA ATTGGGTCAA CAAGGGTGAC TGTTACTCGT CTACTTGGAG ACCTCAGGCA AGATGAAATG ATATCTATTC ATAAAAAGAA AATTACAGTA CATAACCCAG TAGCTTTAAG TCAGCAATTT ACTTAA
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Protein sequence | MTHDRPLASV FRNISGGSYP PVIETFERSK TIFFPGDPAE RVYVLIKGAV KLSRVYEAGD EITVALLREN SVFGVLSLIT GHKSDRFYHA VAFTPVELIS VPIDQVEKAL REDPELSVIL LRGLSSRILQ TEMMIETLAH RDMGSRLVSF LLILCRDFGV PRDDGIMIDL KLSHQAIAEA IGSTRVTVTR LLGDLRQDEM ISIHKKKITV HNPVALSQQF T
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