Gene Tery_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_2023 
Symbol 
ID4243627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp3150496 
End bp3151161 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content40% 
IMG OID638107140 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_721743 
Protein GI113475682 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0496812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCATG ATAGACCGCT AGCATCTGTT TTCCGTAATA TATCTGGTGG CTCATATCCA 
CCAGTGATAG AAACTTTTGA GCGGAGCAAG ACAATATTTT TTCCAGGAGA TCCTGCCGAG
CGTGTCTACG TCTTAATAAA AGGCGCAGTA AAGCTATCTA GGGTTTATGA AGCAGGAGAC
GAAATTACAG TAGCCTTACT TAGGGAGAAT AGTGTATTTG GTGTGCTATC TCTAATAACA
GGCCATAAGT CAGATCGTTT CTACCATGCA GTGGCATTTA CTCCAGTAGA GTTAATATCA
GTGCCAATTG ACCAAGTAGA AAAAGCTCTA AGAGAAGATC CAGAACTGTC AGTTATTCTA
TTGCGTGGAC TATCATCCCG AATTTTACAG ACAGAAATGA TGATTGAAAC CTTGGCACAC
CGAGATATGG GTTCTAGACT GGTTAGCTTT TTGTTAATCC TTTGTCGAGA TTTTGGAGTT
CCTAGAGATG ATGGGATTAT GATTGACTTG AAATTATCTC ACCAAGCAAT TGCAGAAGCA
ATTGGGTCAA CAAGGGTGAC TGTTACTCGT CTACTTGGAG ACCTCAGGCA AGATGAAATG
ATATCTATTC ATAAAAAGAA AATTACAGTA CATAACCCAG TAGCTTTAAG TCAGCAATTT
ACTTAA
 
Protein sequence
MTHDRPLASV FRNISGGSYP PVIETFERSK TIFFPGDPAE RVYVLIKGAV KLSRVYEAGD 
EITVALLREN SVFGVLSLIT GHKSDRFYHA VAFTPVELIS VPIDQVEKAL REDPELSVIL
LRGLSSRILQ TEMMIETLAH RDMGSRLVSF LLILCRDFGV PRDDGIMIDL KLSHQAIAEA
IGSTRVTVTR LLGDLRQDEM ISIHKKKITV HNPVALSQQF T