Gene NATL1_03241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03241 
SymbolntcA 
ID4780589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp301052 
End bp301783 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID640083590 
ProductCRP family global nitrogen regulatory protein 
Protein accessionYP_001014153 
Protein GI124025037 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACTT CATATCGTGG CTTTACTCGT TTCAACCAAC CCAAAAATAG CCAGATGGTT 
GGTAACTCCT CAACTCCATT GCCGCCAAAT AAAACTCTCT TAGATGTAAT TAAATCTTTG
GAGGGAGTTT CTACTGAAAC TGTAGATAGA TCAAAAACTA TTTTTTTTCC TGGTGATCCT
GCCGAAAGGG TTTATTTGAT AAGACGTGGT GCAGTTCGAT TGAGCAGAGT CTATGAAACG
GGTGAAGAAA TTACTGTTGC TTTGTTGAGA GAAAATAGTC TGTTTGGAGT TTTATCTTTA
TTGACAGGTC ATAGATCAGA TCGTTTTTAT CACGCTGTTG CCTTTACACG TGTGGAACTC
GTTTCTGCTC CAGCCACTTC ATTAAGGAAT GCAATAGAGC AAGATGCCTC TGTTGGGTTG
CTCCTTTTAC AAGGTTTATC AAGTCGAGTA CTTCAAACTG AAACAATGAT TGAAACTTTA
ACTCATAGAG ATATGTCTTC TCGTCTCGCA AGTTTTTTAC TTGTTTTGTG TAGAGACTTT
GGTGTGCCTG GGGAAAAAGG AGTCACAATT GACTTAAGAC TCTCTCATCA AGCTATTGCT
GAAGCAATAG GTTCAACCAG AGTTACTATT ACACGACTAC TTGGTGAGTT GAAAAGTTCC
TCATTATTGG CAATAGATAG GAAGAAAATA ACCATATTCG ATCCAATAGC GTTAGCAAAA
AGATTTAATT GA
 
Protein sequence
MVTSYRGFTR FNQPKNSQMV GNSSTPLPPN KTLLDVIKSL EGVSTETVDR SKTIFFPGDP 
AERVYLIRRG AVRLSRVYET GEEITVALLR ENSLFGVLSL LTGHRSDRFY HAVAFTRVEL
VSAPATSLRN AIEQDASVGL LLLQGLSSRV LQTETMIETL THRDMSSRLA SFLLVLCRDF
GVPGEKGVTI DLRLSHQAIA EAIGSTRVTI TRLLGELKSS SLLAIDRKKI TIFDPIALAK
RFN