More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_1844 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  100 
 
 
240 aa  474  1e-133  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_007493  RSP_2963  Crp/FNR family transcriptional regulator  88.64 
 
 
218 aa  380  1e-105  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.281309  n/a   
 
 
-
 
NC_009049  Rsph17029_1610  CRP/FNR family transcriptional regulator  88.64 
 
 
218 aa  380  1e-105  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.503286  normal  0.0459235 
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  45.87 
 
 
224 aa  184  2.0000000000000003e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_009952  Dshi_2521  transcriptional regulator  42.47 
 
 
225 aa  173  2.9999999999999996e-42  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0399516 
 
 
-
 
NC_011901  Tgr7_1360  putative transcriptional regulator, Crp/Fnr family  43.13 
 
 
223 aa  167  1e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1245  Crp/FNR family transcriptional regulator  46.07 
 
 
216 aa  166  2e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61444  n/a   
 
 
-
 
NC_007958  RPD_1260  Crp/Fnr family transcriptional regulator  43.41 
 
 
230 aa  156  3e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.611189 
 
 
-
 
NC_011206  Lferr_0120  transcriptional regulator, Crp/Fnr family  37.16 
 
 
231 aa  148  7e-35  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0119  transcriptional regulator, Crp/Fnr family  36.65 
 
 
220 aa  148  9e-35  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.701779  n/a   
 
 
-
 
NC_011004  Rpal_1280  transcriptional regulator, Crp/Fnr family  43.35 
 
 
223 aa  145  6e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3643  Crp/FNR family transcriptional regulator  35.94 
 
 
221 aa  143  2e-33  Ruegeria sp. TM1040  Bacteria  normal  0.621489  normal 
 
 
-
 
NC_007298  Daro_3649  cyclic nucleotide-binding: regulatory protein, Crp  41.04 
 
 
222 aa  142  6e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.111908  normal 
 
 
-
 
NC_011662  Tmz1t_1459  transcriptional regulator, Crp/Fnr family  38.5 
 
 
228 aa  142  6e-33  Thauera sp. MZ1T  Bacteria  normal  0.351279  n/a   
 
 
-
 
NC_007778  RPB_1158  Crp/FNR family transcriptional regulator  43.9 
 
 
224 aa  141  7e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.1478 
 
 
-
 
NC_007925  RPC_4303  Crp/FNR family transcriptional regulator  40 
 
 
224 aa  140  9.999999999999999e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.50399  normal  0.0335378 
 
 
-
 
NC_008740  Maqu_2052  CRP/FNR family transcriptional regulator  41.62 
 
 
213 aa  137  2e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3202  Crp/FNR family transcriptional regulator  34.3 
 
 
220 aa  131  9e-30  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000000322643  normal 
 
 
-
 
NC_010524  Lcho_0203  Crp/FNR family transcriptional regulator  38.94 
 
 
247 aa  116  3e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.270076 
 
 
-
 
NC_011831  Cagg_2104  transcriptional regulator, Crp/Fnr family  34.76 
 
 
229 aa  115  6.9999999999999995e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4775  Crp/FNR family transcriptional regulator  34.38 
 
 
224 aa  112  5e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3266  CRP/FNR family transcriptional regulator  33.33 
 
 
222 aa  107  2e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0022  Crp/FNR family transcriptional regulator  33.51 
 
 
229 aa  103  3e-21  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4871  CRP/FNR family transcriptional regulator  28.41 
 
 
208 aa  100  3e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0245964  n/a   
 
 
-
 
NC_012039  Cla_0784  transcriptional regulator, Crp/Fnr family  27.23 
 
 
201 aa  97.1  2e-19  Campylobacter lari RM2100  Bacteria  normal  0.706158  n/a   
 
 
-
 
NC_008599  CFF8240_0428  Crp family transcriptional regulator  28.65 
 
 
201 aa  96.3  4e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2978  Crp/FNR family transcriptional regulator  29.63 
 
 
235 aa  92.8  4e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  27.73 
 
 
236 aa  91.3  1e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  28.64 
 
 
243 aa  91.7  1e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011830  Dhaf_1507  transcriptional regulator, Crp/Fnr family  30.16 
 
 
227 aa  90.9  2e-17  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00368382  n/a   
 
 
-
 
NC_010001  Cphy_0740  Crp/FNR family transcriptional regulator  26.67 
 
 
224 aa  87.8  1e-16  Clostridium phytofermentans ISDg  Bacteria  normal  0.194826  n/a   
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  32.08 
 
 
222 aa  88.2  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_11833  transcriptional regulator, Crp family protein  23.76 
 
 
208 aa  87  2e-16  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1573  Crp family transcriptional regulator  26.7 
 
 
283 aa  85.5  7e-16  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013732  Slin_6930  transcriptional regulator, Crp/Fnr family  24.44 
 
 
211 aa  84  0.000000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  30.39 
 
 
223 aa  83.2  0.000000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  31.52 
 
 
222 aa  80.5  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_12618  transcriptional regulator, Crp family protein  23.6 
 
 
210 aa  80.9  0.00000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  26.85 
 
 
234 aa  80.5  0.00000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  26.67 
 
 
226 aa  80.5  0.00000000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  28.11 
 
 
228 aa  80.5  0.00000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  25 
 
 
241 aa  79.3  0.00000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2528  putative transcriptional regulator  30.32 
 
 
251 aa  78.6  0.00000000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.244849 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  29.58 
 
 
225 aa  77  0.0000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_6174  transcriptional regulator, Crp/Fnr family  23.33 
 
 
212 aa  77  0.0000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  25.23 
 
 
227 aa  77  0.0000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  26.94 
 
 
229 aa  76.6  0.0000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  28.57 
 
 
254 aa  76.3  0.0000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  30.94 
 
 
224 aa  76.3  0.0000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  25.46 
 
 
228 aa  76.3  0.0000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  30.3 
 
 
228 aa  75.9  0.0000000000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  26.2 
 
 
229 aa  75.9  0.0000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  24.65 
 
 
230 aa  75.5  0.0000000000007  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  26.03 
 
 
227 aa  75.5  0.0000000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  26.79 
 
 
229 aa  75.5  0.0000000000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  26.79 
 
 
246 aa  75.1  0.0000000000009  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  26.67 
 
 
229 aa  74.7  0.000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  27.27 
 
 
225 aa  74.7  0.000000000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  25.12 
 
 
236 aa  73.9  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  28.31 
 
 
234 aa  73.9  0.000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  30 
 
 
228 aa  74.3  0.000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  29.33 
 
 
228 aa  73.6  0.000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1896  cyclic nucleotide-binding protein  29.69 
 
 
218 aa  73.6  0.000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  28.85 
 
 
225 aa  73.2  0.000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  29.38 
 
 
226 aa  73.2  0.000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  28.84 
 
 
236 aa  73.2  0.000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1798  transcriptional regulator, Crp/Fnr family  29.38 
 
 
224 aa  73.2  0.000000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.112724  normal  0.701218 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  29.15 
 
 
224 aa  72.4  0.000000000006  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  26.77 
 
 
232 aa  72.4  0.000000000006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2609  transcriptional regulator, Crp/Fnr family  24.72 
 
 
212 aa  72.4  0.000000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.111906 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.38 
 
 
226 aa  71.2  0.00000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  26.52 
 
 
231 aa  71.2  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  28.96 
 
 
225 aa  71.2  0.00000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  26.56 
 
 
222 aa  71.6  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  28.12 
 
 
254 aa  71.2  0.00000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  30.39 
 
 
218 aa  71.6  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  28.73 
 
 
227 aa  71.2  0.00000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  26.17 
 
 
229 aa  71.2  0.00000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  28.12 
 
 
254 aa  71.2  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  26.29 
 
 
230 aa  71.2  0.00000000001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  28.57 
 
 
224 aa  70.5  0.00000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  28.19 
 
 
228 aa  70.9  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_010508  Bcenmc03_2565  Crp/FNR family transcriptional regulator  28.95 
 
 
235 aa  70.9  0.00000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0695171  normal  0.0307054 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  22.87 
 
 
225 aa  70.1  0.00000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  24.1 
 
 
227 aa  70.1  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_008463  PA14_27700  putative transcriptional regulator  26.61 
 
 
241 aa  69.7  0.00000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0112492 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  28.64 
 
 
226 aa  69.7  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_010551  BamMC406_2459  Crp/FNR family transcriptional regulator  28.45 
 
 
235 aa  69.3  0.00000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.0000341213 
 
 
-
 
NC_007651  BTH_I0747  transcriptional regulator, putative  28.31 
 
 
266 aa  69.7  0.00000000004  Burkholderia thailandensis E264  Bacteria  normal  0.59923  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  25.82 
 
 
230 aa  69.7  0.00000000004  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.71 
 
 
225 aa  69.3  0.00000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  24.1 
 
 
227 aa  69.7  0.00000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  28.21 
 
 
233 aa  69.3  0.00000000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  25.96 
 
 
236 aa  68.9  0.00000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  28.21 
 
 
233 aa  69.3  0.00000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  28.44 
 
 
231 aa  68.9  0.00000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.03 
 
 
225 aa  68.9  0.00000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  28.57 
 
 
240 aa  68.9  0.00000000007  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  27.96 
 
 
226 aa  68.6  0.00000000009  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.44 
 
 
225 aa  68.6  0.00000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>