More than 300 homologs were found in PanDaTox collection
for query gene Syncc9605_1146 on replicon NC_007516
Organism: Synechococcus sp. CC9605



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  100 
 
 
211 aa  426  1e-118  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  49.76 
 
 
208 aa  200  9.999999999999999e-51  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  43.41 
 
 
233 aa  168  6e-41  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  46.15 
 
 
200 aa  154  1e-36  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  46.15 
 
 
200 aa  154  1e-36  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  44.51 
 
 
218 aa  153  2e-36  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  40.66 
 
 
199 aa  145  4.0000000000000006e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  36.26 
 
 
393 aa  141  5e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_008819  NATL1_11461  CRP/FNR family transcriptional regulator  37.25 
 
 
210 aa  140  1.9999999999999998e-32  Prochlorococcus marinus str. NATL1A  Bacteria  normal  hitchhiker  0.00962041 
 
 
-
 
NC_007335  PMN2A_0435  regulatory protein, Crp  36.76 
 
 
210 aa  135  3.0000000000000003e-31  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0427117  n/a   
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  38.37 
 
 
405 aa  129  3e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  37.95 
 
 
389 aa  126  3e-28  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  34.94 
 
 
223 aa  106  2e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  34.34 
 
 
223 aa  106  3e-22  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  34.94 
 
 
223 aa  105  7e-22  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  34.94 
 
 
225 aa  104  9e-22  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  34.94 
 
 
225 aa  104  9e-22  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  34.94 
 
 
225 aa  104  1e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  33.13 
 
 
221 aa  100  2e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  31.36 
 
 
197 aa  96.7  2e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  33.73 
 
 
210 aa  95.5  5e-19  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  33.53 
 
 
238 aa  93.6  2e-18  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  33.73 
 
 
222 aa  94  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  33.13 
 
 
222 aa  93.6  2e-18  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  33.73 
 
 
243 aa  90.5  1e-17  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  33.73 
 
 
243 aa  90.5  1e-17  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  31.93 
 
 
244 aa  89  5e-17  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  35.66 
 
 
225 aa  88.6  6e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  31.33 
 
 
244 aa  88.6  6e-17  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  31.93 
 
 
244 aa  88.6  6e-17  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  34.81 
 
 
254 aa  86.3  3e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  29.89 
 
 
195 aa  86.3  4e-16  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  30.72 
 
 
244 aa  85.1  6e-16  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  30.41 
 
 
247 aa  82  0.000000000000005  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  32.5 
 
 
206 aa  82  0.000000000000006  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  34.69 
 
 
256 aa  79.3  0.00000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  33.54 
 
 
228 aa  77.8  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  31.44 
 
 
231 aa  77.8  0.0000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  31.61 
 
 
209 aa  76.6  0.0000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  34.55 
 
 
228 aa  77  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  29.19 
 
 
208 aa  74.3  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  33.33 
 
 
226 aa  74.3  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.63 
 
 
219 aa  73.9  0.000000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  26.04 
 
 
226 aa  73.9  0.000000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  33.13 
 
 
202 aa  72.8  0.000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  28.05 
 
 
227 aa  72.8  0.000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32.73 
 
 
226 aa  72.4  0.000000000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007413  Ava_1750  Crp/FNR family transcriptional regulator  35.21 
 
 
239 aa  71.2  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.499959  normal 
 
 
-
 
NC_014248  Aazo_0140  putative Crp/Fnr family transcriptional regulator  35.21 
 
 
239 aa  71.2  0.00000000001  'Nostoc azollae' 0708  Bacteria  normal  0.0938698  n/a   
 
 
-
 
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  28.29 
 
 
211 aa  70.9  0.00000000002  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  33.33 
 
 
228 aa  70.1  0.00000000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  26.99 
 
 
305 aa  70.5  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  32.35 
 
 
225 aa  70.5  0.00000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.76 
 
 
225 aa  70.1  0.00000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  26.4 
 
 
239 aa  70.1  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  30.12 
 
 
225 aa  70.1  0.00000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  30.54 
 
 
232 aa  70.1  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  31.74 
 
 
225 aa  69.7  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  30.86 
 
 
202 aa  69.3  0.00000000004  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  29.78 
 
 
224 aa  69.3  0.00000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  32.53 
 
 
244 aa  68.9  0.00000000005  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  30.43 
 
 
225 aa  68.6  0.00000000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  30.23 
 
 
222 aa  68.6  0.00000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  27.38 
 
 
225 aa  68.2  0.00000000009  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  31.98 
 
 
218 aa  67.8  0.0000000001  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  33.14 
 
 
229 aa  67.8  0.0000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  29.45 
 
 
243 aa  67.8  0.0000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  32.91 
 
 
235 aa  66.6  0.0000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  30.54 
 
 
225 aa  66.6  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  32.14 
 
 
226 aa  65.9  0.0000000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  27.22 
 
 
232 aa  65.9  0.0000000005  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  25.57 
 
 
232 aa  65.5  0.0000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  31.98 
 
 
224 aa  65.1  0.0000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_004311  BRA0281  transcriptional regulator NnrR  26.58 
 
 
232 aa  64.7  0.0000000009  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  29.71 
 
 
236 aa  64.3  0.000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  30.43 
 
 
226 aa  63.5  0.000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  31.11 
 
 
251 aa  63.5  0.000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  28.32 
 
 
236 aa  63.9  0.000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  30 
 
 
235 aa  62.8  0.000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.65 
 
 
225 aa  62.8  0.000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  28.98 
 
 
232 aa  62  0.000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  24.69 
 
 
238 aa  62  0.000000006  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  29.31 
 
 
236 aa  62  0.000000007  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  27.37 
 
 
230 aa  61.6  0.000000008  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  31.55 
 
 
242 aa  61.6  0.000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  29.82 
 
 
224 aa  61.2  0.00000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.43 
 
 
226 aa  60.8  0.00000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  31.65 
 
 
220 aa  60.8  0.00000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_009972  Haur_2113  CRP/FNR family transcriptional regulator  26.71 
 
 
313 aa  61.2  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000556838  n/a   
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  30.64 
 
 
217 aa  60.8  0.00000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  24.56 
 
 
228 aa  60.8  0.00000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  28.82 
 
 
225 aa  60.5  0.00000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  30.18 
 
 
227 aa  60.5  0.00000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  30.48 
 
 
234 aa  59.7  0.00000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  32 
 
 
224 aa  59.7  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  26.44 
 
 
231 aa  58.9  0.00000005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  26.44 
 
 
231 aa  58.9  0.00000005  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  30.43 
 
 
250 aa  58.9  0.00000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  34.73 
 
 
232 aa  58.5  0.00000007  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  25.61 
 
 
223 aa  58.5  0.00000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
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