Gene Syncc9605_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1146 
Symbol 
ID3735911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1077309 
End bp1077944 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID637775735 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_381456 
Protein GI78212677 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.242619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTA CTCCGTCGGC TGATCTGAGT TCAACAGCTC TTGGTTTCAA GGCGTTTCTT 
GAAAACAGCT ACGACAATCG CAATGTTGTT CATGTCACCT CGGGAAGTTT TGTTCCTCTG
CTGAAGAACA GCGTTTGGTT TGTGGTGCGC GGCATGGTGA AGCTGGGGGC GCTGTCGGTG
CATGGCGATG AGCTGGTGCT GGGCATGGTT GGCCCCAACG AACCCTTCGG TGCCGCATTC
ACCAATGTGG AGGCCTATGA GGCTGTAGCG CTCACCGATT GCGATCTGCT CTGCTGCAAT
CTGGCGGAGC TGGAGCAGTC TCCCGAATTG GCGCTTGGTC TTGCCAAGGC CATGGCCGCC
CGCTACCGCC AGGCGGAGTC GCTCCTGGCC CTGCTCGGGC TACGTCGCGT TGAAGAGCGG
GTGCGGGGCT TCCTGGAGCT GCTCGCCAAG GACTTTGGCG AACCTTGTGA GGCCGGGTTG
CGGCTCAACC TTCGCCTGAC CCATCAGGAG ATCGCCAGTG CCCTGAGCAC CACACGGGTC
ACCGTGACCC GCGTTTTGGG GCAGTTGCGG GATGAAGGCT GGTTGCAGAT TGATGCCTCC
AGGCATCTGG TGGTGAGCGG CACCGGCCGC CGCTGA
 
Protein sequence
MLATPSADLS STALGFKAFL ENSYDNRNVV HVTSGSFVPL LKNSVWFVVR GMVKLGALSV 
HGDELVLGMV GPNEPFGAAF TNVEAYEAVA LTDCDLLCCN LAELEQSPEL ALGLAKAMAA
RYRQAESLLA LLGLRRVEER VRGFLELLAK DFGEPCEAGL RLNLRLTHQE IASALSTTRV
TVTRVLGQLR DEGWLQIDAS RHLVVSGTGR R