More than 300 homologs were found in PanDaTox collection
for query gene PCC8801_0346 on replicon NC_011726
Organism: Cyanothece sp. PCC 8801



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  99.5 
 
 
200 aa  404  1.0000000000000001e-112  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  100 
 
 
200 aa  405  1.0000000000000001e-112  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  67.34 
 
 
199 aa  263  1e-69  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  54.14 
 
 
218 aa  183  2.0000000000000003e-45  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  45.55 
 
 
393 aa  171  5e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  48.31 
 
 
208 aa  165  5e-40  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  44.13 
 
 
211 aa  163  2.0000000000000002e-39  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  41.44 
 
 
389 aa  150  1e-35  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  45.71 
 
 
405 aa  144  7.0000000000000006e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  30.16 
 
 
233 aa  105  3e-22  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  32.62 
 
 
225 aa  94.4  1e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_11461  CRP/FNR family transcriptional regulator  32.56 
 
 
210 aa  87.8  1e-16  Prochlorococcus marinus str. NATL1A  Bacteria  normal  hitchhiker  0.00962041 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  32.02 
 
 
225 aa  87  2e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  32.02 
 
 
225 aa  87  2e-16  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  32.45 
 
 
222 aa  86.3  3e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_007335  PMN2A_0435  regulatory protein, Crp  31.98 
 
 
210 aa  84.7  8e-16  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0427117  n/a   
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  31.32 
 
 
223 aa  84  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  29.21 
 
 
197 aa  83.2  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  33.14 
 
 
206 aa  83.6  0.000000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  33.73 
 
 
210 aa  82.8  0.000000000000003  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  33.33 
 
 
209 aa  82.4  0.000000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  33.73 
 
 
238 aa  80.9  0.00000000000001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  33.13 
 
 
222 aa  80.9  0.00000000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  33.53 
 
 
243 aa  80.5  0.00000000000002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  31.52 
 
 
223 aa  80.5  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  33.53 
 
 
243 aa  80.5  0.00000000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  31.52 
 
 
223 aa  80.1  0.00000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  32.72 
 
 
195 aa  79.7  0.00000000000003  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  32.37 
 
 
244 aa  79.7  0.00000000000003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  32.37 
 
 
244 aa  78.6  0.00000000000005  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  28.78 
 
 
221 aa  78.6  0.00000000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  31.79 
 
 
244 aa  78.2  0.00000000000007  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  32.37 
 
 
244 aa  78.2  0.00000000000008  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  31.76 
 
 
305 aa  76.3  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  34.51 
 
 
225 aa  73.9  0.000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  26.73 
 
 
247 aa  73.6  0.000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  29.61 
 
 
208 aa  71.6  0.000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.17 
 
 
224 aa  69.3  0.00000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  29.81 
 
 
256 aa  68.9  0.00000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  29.38 
 
 
235 aa  68.9  0.00000000005  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  28.4 
 
 
226 aa  67.8  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  30.25 
 
 
202 aa  67.8  0.0000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  30.17 
 
 
211 aa  67.4  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.24 
 
 
225 aa  67.4  0.0000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  28 
 
 
226 aa  65.9  0.0000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  28.74 
 
 
232 aa  65.9  0.0000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  28.8 
 
 
242 aa  65.5  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  26.95 
 
 
223 aa  65.5  0.0000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  27.91 
 
 
226 aa  65.5  0.0000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.06 
 
 
225 aa  65.1  0.0000000006  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  26.29 
 
 
226 aa  63.9  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.04 
 
 
225 aa  64.3  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.54 
 
 
228 aa  63.2  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  26.47 
 
 
225 aa  63.5  0.000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007413  Ava_1750  Crp/FNR family transcriptional regulator  27.27 
 
 
239 aa  63.5  0.000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.499959  normal 
 
 
-
 
NC_014248  Aazo_0140  putative Crp/Fnr family transcriptional regulator  27.27 
 
 
239 aa  63.5  0.000000002  'Nostoc azollae' 0708  Bacteria  normal  0.0938698  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  26.71 
 
 
254 aa  63.2  0.000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009976  P9211_02711  global nitrogen regulatory protein  32.95 
 
 
244 aa  62.8  0.000000004  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  27.32 
 
 
254 aa  62  0.000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  26.59 
 
 
202 aa  61.6  0.000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  27.32 
 
 
254 aa  61.6  0.000000007  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_008312  Tery_4941  CRP/FNR family transcriptional regulator  61.36 
 
 
45 aa  61.6  0.000000008  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  22.29 
 
 
227 aa  61.2  0.00000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.37 
 
 
225 aa  61.2  0.00000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  27.67 
 
 
226 aa  60.8  0.00000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  29.27 
 
 
227 aa  60.1  0.00000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  27.27 
 
 
235 aa  60.5  0.00000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  25.43 
 
 
224 aa  60.1  0.00000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  26.74 
 
 
228 aa  59.7  0.00000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  26.01 
 
 
236 aa  59.7  0.00000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  29.89 
 
 
222 aa  59.3  0.00000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_009523  RoseRS_0244  CRP/FNR family transcriptional regulator  31.07 
 
 
228 aa  58.9  0.00000005  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0431251 
 
 
-
 
NC_007513  Syncc9902_1998  CRP/FNR family transcriptional regulator  46.03 
 
 
207 aa  58.5  0.00000006  Synechococcus sp. CC9902  Bacteria  hitchhiker  0.00839318  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  23.08 
 
 
226 aa  58.5  0.00000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  27.38 
 
 
254 aa  57.8  0.00000009  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  23.76 
 
 
219 aa  58.2  0.00000009  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009972  Haur_2113  CRP/FNR family transcriptional regulator  26.04 
 
 
313 aa  57.4  0.0000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000556838  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  22.67 
 
 
225 aa  57.8  0.0000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  21.51 
 
 
232 aa  57.8  0.0000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  25.15 
 
 
267 aa  57.8  0.0000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  25.93 
 
 
225 aa  57.8  0.0000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  24.86 
 
 
236 aa  57  0.0000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  20.11 
 
 
236 aa  57  0.0000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  20.11 
 
 
236 aa  57  0.0000002  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_008312  Tery_1663  CRP/FNR family transcriptional regulator  30 
 
 
179 aa  57.4  0.0000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.231367  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.83 
 
 
227 aa  56.6  0.0000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6164  transcriptional regulator, Crp/Fnr family  23.53 
 
 
247 aa  56.2  0.0000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.257657  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  23.43 
 
 
231 aa  56.2  0.0000003  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.29 
 
 
239 aa  56.2  0.0000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  30.83 
 
 
234 aa  56.2  0.0000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  26.67 
 
 
230 aa  56.2  0.0000003  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  29.07 
 
 
235 aa  55.8  0.0000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_009485  BBta_3690  cyclic nucleotide-binding protein  28.85 
 
 
224 aa  55.5  0.0000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142322  normal 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  23.86 
 
 
236 aa  55.5  0.0000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008340  Mlg_0319  Crp/FNR family transcriptional regulator  26.78 
 
 
262 aa  55.5  0.0000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  25.44 
 
 
229 aa  55.5  0.0000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  25.14 
 
 
250 aa  54.7  0.0000009  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  25.14 
 
 
250 aa  54.7  0.0000009  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  24.74 
 
 
240 aa  54.3  0.000001  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_008025  Dgeo_1015  CRP/FNR family transcriptional regulator  25.43 
 
 
204 aa  54.3  0.000001  Deinococcus geothermalis DSM 11300  Bacteria  unclonable  0.00000000202163  unclonable  0.0000000139192 
 
 
-
 
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