221 homologs were found in PanDaTox collection
for query gene P9303_11071 on replicon NC_008820
Organism: Prochlorococcus marinus str. MIT 9303



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  100 
 
 
233 aa  479  1e-134  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  43.41 
 
 
211 aa  168  8e-41  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  29.61 
 
 
208 aa  104  2e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  30.16 
 
 
200 aa  96.7  3e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  30.16 
 
 
200 aa  96.7  3e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  28.26 
 
 
393 aa  95.9  5e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  29.19 
 
 
218 aa  95.1  9e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  30.68 
 
 
405 aa  91.3  1e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  30.81 
 
 
199 aa  91.3  1e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008819  NATL1_11461  CRP/FNR family transcriptional regulator  30.64 
 
 
210 aa  85.1  7e-16  Prochlorococcus marinus str. NATL1A  Bacteria  normal  hitchhiker  0.00962041 
 
 
-
 
NC_007335  PMN2A_0435  regulatory protein, Crp  30.06 
 
 
210 aa  81.6  0.000000000000009  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0427117  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  27.66 
 
 
254 aa  79.3  0.00000000000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  25.84 
 
 
389 aa  77  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  27.71 
 
 
225 aa  73.9  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  27.71 
 
 
225 aa  73.9  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  29.68 
 
 
247 aa  73.2  0.000000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  27.11 
 
 
225 aa  72.4  0.000000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  25.3 
 
 
223 aa  68.6  0.00000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  25.3 
 
 
223 aa  67  0.0000000002  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007413  Ava_3366  Crp/FNR family transcriptional regulator  27.78 
 
 
208 aa  67  0.0000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.698764  normal  0.804601 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  26.51 
 
 
223 aa  65.9  0.0000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  25.3 
 
 
221 aa  63.9  0.000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  23.66 
 
 
197 aa  63.2  0.000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  25.9 
 
 
222 aa  63.5  0.000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  28.07 
 
 
219 aa  63.5  0.000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  23.67 
 
 
224 aa  63.2  0.000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  22.94 
 
 
226 aa  61.2  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  23.53 
 
 
228 aa  59.7  0.00000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  24.04 
 
 
231 aa  58.5  0.00000009  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  25.47 
 
 
222 aa  57.8  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25.3 
 
 
226 aa  58.2  0.0000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  26.74 
 
 
227 aa  57.8  0.0000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  25.4 
 
 
225 aa  57.4  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_013440  Hoch_1697  transcriptional regulator, Crp/Fnr family  25 
 
 
259 aa  56.6  0.0000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.314621  hitchhiker  0.0000199045 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  27.41 
 
 
249 aa  56.2  0.0000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  22.35 
 
 
228 aa  55.8  0.0000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_008609  Ppro_2444  Crp/FNR family transcriptional regulator  25.15 
 
 
238 aa  55.8  0.0000006  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.000577484  n/a   
 
 
-
 
NC_011884  Cyan7425_2869  putative transcriptional regulator, Crp/Fnr family  20.9 
 
 
211 aa  55.5  0.0000008  Cyanothece sp. PCC 7425  Bacteria  decreased coverage  0.00060408  normal  0.537416 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  21.76 
 
 
225 aa  55.1  0.000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007974  Rmet_4521  Crp/Fnr family transcriptional regulator  25.25 
 
 
257 aa  54.7  0.000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.0161618  normal  0.0108643 
 
 
-
 
NC_014248  Aazo_0990  putative Crp/Fnr family transcriptional regulator  21.47 
 
 
195 aa  54.7  0.000001  'Nostoc azollae' 0708  Bacteria  normal  0.596823  n/a   
 
 
-
 
NC_010524  Lcho_2772  Crp/FNR family transcriptional regulator  26.35 
 
 
245 aa  55.1  0.000001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00275745 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  22.73 
 
 
225 aa  54.7  0.000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  26.26 
 
 
240 aa  54.7  0.000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  22.42 
 
 
242 aa  53.9  0.000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  21.26 
 
 
226 aa  54.3  0.000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  24.14 
 
 
225 aa  53.9  0.000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  24.56 
 
 
229 aa  53.9  0.000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  24.48 
 
 
232 aa  53.9  0.000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  28.07 
 
 
229 aa  54.3  0.000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_009972  Haur_2113  CRP/FNR family transcriptional regulator  24.04 
 
 
313 aa  53.5  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000556838  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  24.26 
 
 
238 aa  53.1  0.000003  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  22.92 
 
 
256 aa  53.5  0.000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_010424  Daud_0783  CRP/FNR family transcriptional regulator  24.43 
 
 
217 aa  53.5  0.000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  22.35 
 
 
225 aa  53.5  0.000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  27.37 
 
 
352 aa  53.1  0.000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  22.75 
 
 
256 aa  53.1  0.000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  30.48 
 
 
226 aa  53.1  0.000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  23.08 
 
 
210 aa  52.8  0.000005  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  23.73 
 
 
235 aa  52.8  0.000005  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  28.12 
 
 
229 aa  52.4  0.000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  26.95 
 
 
209 aa  52  0.000007  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  21.98 
 
 
260 aa  52  0.000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  24.32 
 
 
234 aa  52.4  0.000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  27.01 
 
 
229 aa  52  0.000008  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  25.77 
 
 
227 aa  52  0.000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  25.86 
 
 
242 aa  51.6  0.00001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  24.14 
 
 
242 aa  51.2  0.00001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  24 
 
 
202 aa  51.6  0.00001  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_010730  SYO3AOP1_0394  transcriptional regulator, Crp/Fnr family  28.12 
 
 
237 aa  51.2  0.00002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  26.35 
 
 
242 aa  50.4  0.00002  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  24.04 
 
 
230 aa  50.4  0.00002  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  22.99 
 
 
236 aa  51.2  0.00002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  25.15 
 
 
250 aa  50.4  0.00002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_011126  HY04AAS1_0644  transcriptional regulator, Crp/Fnr family  25.6 
 
 
243 aa  50.8  0.00002  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000386152  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  20.11 
 
 
224 aa  50.8  0.00002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6107  Crp/FNR family transcriptional regulator  28.39 
 
 
227 aa  50.8  0.00002  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0266042 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  20.73 
 
 
222 aa  50.4  0.00002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_003295  RSc0190  transcription regulator protein  24.7 
 
 
266 aa  50.1  0.00003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.180711 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  22.16 
 
 
241 aa  50.1  0.00003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  24.42 
 
 
236 aa  50.1  0.00003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  23.31 
 
 
237 aa  50.4  0.00003  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  24.18 
 
 
228 aa  50.1  0.00003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  25.9 
 
 
244 aa  49.7  0.00003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  21.05 
 
 
228 aa  49.7  0.00004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1684  CRP/FNR family transcriptional regulator  23.46 
 
 
206 aa  49.7  0.00004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.24693  normal  0.330754 
 
 
-
 
NC_008148  Rxyl_2796  Crp/FNR family transcriptional regulator  26.06 
 
 
250 aa  49.7  0.00004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_1132  transcriptional regulator  21.08 
 
 
355 aa  49.7  0.00004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.99008 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  31.58 
 
 
230 aa  49.7  0.00004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  27.91 
 
 
251 aa  49.3  0.00005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  24.26 
 
 
243 aa  48.9  0.00006  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1835  Crp/FNR family transcriptional regulator  19.89 
 
 
250 aa  49.3  0.00006  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0256984  n/a   
 
 
-
 
NC_008825  Mpe_A2471  transcription factor Fnr  24.73 
 
 
269 aa  48.9  0.00006  Methylibium petroleiphilum PM1  Bacteria  normal  0.366844  normal  0.0435693 
 
 
-
 
NC_014212  Mesil_1482  transcriptional regulator, Crp/Fnr family  23.86 
 
 
196 aa  49.3  0.00006  Meiothermus silvanus DSM 9946  Bacteria  normal  0.053801  hitchhiker  0.0000318932 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  26.26 
 
 
241 aa  48.9  0.00007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  25.15 
 
 
239 aa  48.9  0.00007  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  23.46 
 
 
226 aa  48.9  0.00007  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  25.44 
 
 
243 aa  48.9  0.00007  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  22.51 
 
 
240 aa  48.9  0.00007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  25.3 
 
 
244 aa  48.5  0.00008  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
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