| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2772 |
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| Symbol | |
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| ID | 6163405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3056325 |
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| End bp | 3057062 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665549 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_001791802 |
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| Protein GI | 171059453 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00275745 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGACA CTGCCGCCTC CTCCCAGCTC AACGCGCTCA AAGTGGCCTG CTCGGCCTGC
AATCTGCGCG AACTGTGCCT GCCAGTGGGC CTGTCAGACG ACGAGATGTC TTCGCTCGAC
AACATGGTGA GCACGCGCCG CAGCGTCAAG CGCGGCGAGA GCCTGTTCCA TTCCGGCGAC
GCGTTCGCGG CGCTCTATGC CGTGCGCACC GGCTTCTTCA AGACCGTGGT GTCGGCCACC
GACGGCCGCG AGCAGGTCAC CGGCTTCCAG ATGGCCGGCG AGCTGATCGG CCTGGACGGC
ATCAGCAACG ACCGCCACTC GTGTGATGCG GTGGCGCTCG AGGATTCGCA GGTCTGCCTG
ATCCCGTACG GCCAGCTCGA GAGCCTGTCG CGCGAGTTCA CGCTGCTGCA GCACCAGTTC
CACAAGATCA TGAGCCGCGA GATCGTGCGC GACCACGGCG TGATGCTGCT GCTCGGCAGC
ATGCGTGCCG AGGAGCGCCT GGCAGCCTTC CTGCTGAACC TGACGCAGCG CCTGCAGGCG
CGTGGTTTCT CGGCCTCGGC GCTGGTGCTG CGCATGACGC GCGAGGAGAT CGGCAGCTAC
CTGGGCCTCA AGCTCGAGAC CGTCAGCCGC ACCTTCTCGA AGTTCCAGGA CGAGGGCTAT
CTCGAGGTCA AGCAGCGCGA CATCCGCATC ATCGACCAGG ACGCCCTGCA GCGCGTGGTC
AACGGCGCCG GCTGCTGA
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| Protein sequence | MQDTAASSQL NALKVACSAC NLRELCLPVG LSDDEMSSLD NMVSTRRSVK RGESLFHSGD
AFAALYAVRT GFFKTVVSAT DGREQVTGFQ MAGELIGLDG ISNDRHSCDA VALEDSQVCL
IPYGQLESLS REFTLLQHQF HKIMSREIVR DHGVMLLLGS MRAEERLAAF LLNLTQRLQA
RGFSASALVL RMTREEIGSY LGLKLETVSR TFSKFQDEGY LEVKQRDIRI IDQDALQRVV
NGAGC
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