Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_11461 |
Symbol | crp |
ID | 4780974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1022912 |
End bp | 1023544 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640084425 |
Product | CRP/FNR family transcriptional regulator |
Protein accession | YP_001014969 |
Protein GI | 124025853 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00962041 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTCAT CTTTTCAGGA ATCCCTGTCC GAAGAAAGTC AGTTTTATGT AGAAATTTTA GAAAATATGT ATCATTCAAA TCATATTGTT AATATTCCTT CAGGAGAAAA AGTATCACTA AGTAAAAGTT ATCTTTGGTT AGTTGTAAGA GGTGTCATAA AAATACAAAC TTTAACTCTA GATGGAGAAC TATCAATACT AGGTTTGGTG AGCAGGGATG AGGTCTTTGG CCAGCCATTA TCTATATCGA ATCCATATGA AGCATATGCA TTGGGCAACT GTGATCTTTT ACCAATTTCA TTAATTGAGA TCGAACAAAA CCCAACTTTA TCTATATCCA TATTTAATGC TCTCAGGAAA ACTTATCAGC AAACTGAAAT GCTTTTGTCA ATCAAGGCAA TCCGAGGAAT GGAAGACAGA ATTAAGTCCT TGTTTATATT TTTAGCAGAG AGATATGGAC GAGATTATAA AGATGGAATT GTCATAGATA TTCGCCTTAC ACATCAGGAA ATAGCTAATT TATTAACAAC AACTAGAGTT ACAGTTACAA GAATAATGAG TGGTTTGAAA GAATCAAAAT GGTTAATCCT AGAAAGAAGC AAATATGTAC TAAAGAAGCA CTCAACTATA TAA
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Protein sequence | MTSSFQESLS EESQFYVEIL ENMYHSNHIV NIPSGEKVSL SKSYLWLVVR GVIKIQTLTL DGELSILGLV SRDEVFGQPL SISNPYEAYA LGNCDLLPIS LIEIEQNPTL SISIFNALRK TYQQTEMLLS IKAIRGMEDR IKSLFIFLAE RYGRDYKDGI VIDIRLTHQE IANLLTTTRV TVTRIMSGLK ESKWLILERS KYVLKKHSTI
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