| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4521 |
|---|
| Symbol | |
|---|
| ID | 4041380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1126289 |
|---|
| End bp | 1127062 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637979943 |
|---|
| Product | Crp/Fnr family transcriptional regulator |
|---|
| Protein accession | YP_586655 |
|---|
| Protein GI | 94313446 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0161618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0108643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAAG TGGTAGAGGG GTCAACCGTC GAAGCAGGAA TGGATGGGGA ATGCACCGGA
CATGCGCACG CGCCGAGCAC GACGCGGCAT TTCCAGGCGC GCTGCATGGA TTGCGGCCTG
CGCCGCCTCT GCATCGCCTC GTCTCTCGAA CCGGAGGAGC TTCCGCAACT GGAAGCCGTG
GTCAGCCACT GGCGCATGGT GCATCGTGGC GAATACCTGT ACCGCTCCGG CGACAAATTC
CAGAACCTCT ACACCGTCCG GTCGGGATCG CTGAAGACCG TGGCCACCCA CGCTGGCGGC
CATGAGCACG TCACCGGCTT CTTCCTGCCG GGAGAAACGG TCGGCCTTGG GGCGATTGGC
GAAGGCGAGT ATGACTGCGA CGCGATTGCG CTCGAAGACA GTGCCGTCTG CGTGCTGCCG
TTCTCACCGC TCGAAGGACT GTGCCGCGAC GTCAAGAGCG TGCAACAGCA TTTCCACCGG
ATGCTGAGCC GCGAGATCCT GCGCGAGTCC AAGCAGATGA TCCTGCTGTC GGGCATGACT
TCGGAACAGC GTGTAGCGGC ATTCCTGATC AACGTGTCGT GTCGCCTGCA GGAACGCGGC
TATGCTTCGC GCGACTTCAC GCTGCGCATG ACCCGCGAGG AAATCGGCAG CTACCTCGGC
ATCAAGCTCG AAACGGTCAG CCGCACGTTC TCCCGCTTCC AGCGCGAAGG CCTGATCCGC
GTGGATGGGA AGCGCATCGA ACTGTTCGAT ATCGAGGCGC TCGCGGCCAT CTGA
|
|---|
| Protein sequence | MYEVVEGSTV EAGMDGECTG HAHAPSTTRH FQARCMDCGL RRLCIASSLE PEELPQLEAV
VSHWRMVHRG EYLYRSGDKF QNLYTVRSGS LKTVATHAGG HEHVTGFFLP GETVGLGAIG
EGEYDCDAIA LEDSAVCVLP FSPLEGLCRD VKSVQQHFHR MLSREILRES KQMILLSGMT
SEQRVAAFLI NVSCRLQERG YASRDFTLRM TREEIGSYLG IKLETVSRTF SRFQREGLIR
VDGKRIELFD IEALAAI
|
|---|
| |