More than 300 homologs were found in PanDaTox collection
for query gene Hoch_1697 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_1697  transcriptional regulator, Crp/Fnr family  100 
 
 
259 aa  519  1e-146  Haliangium ochraceum DSM 14365  Bacteria  normal  0.314621  hitchhiker  0.0000199045 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  29.55 
 
 
229 aa  94.4  2e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  30.94 
 
 
227 aa  92.4  6e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.43 
 
 
225 aa  89.7  5e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  32.04 
 
 
251 aa  88.2  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  31.64 
 
 
225 aa  88.2  1e-16  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  28.82 
 
 
227 aa  87.4  2e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  31.9 
 
 
224 aa  86.7  3e-16  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  26.42 
 
 
222 aa  87  3e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  30.23 
 
 
239 aa  85.9  6e-16  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  32.2 
 
 
226 aa  85.1  9e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  30.89 
 
 
247 aa  84.7  0.000000000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  31.07 
 
 
225 aa  85.1  0.000000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  26.82 
 
 
228 aa  85.1  0.000000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.67 
 
 
219 aa  84.3  0.000000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  30.73 
 
 
224 aa  82.8  0.000000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  30.1 
 
 
223 aa  82.4  0.000000000000006  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  24.22 
 
 
231 aa  82  0.000000000000009  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  28.38 
 
 
236 aa  81.6  0.00000000000001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  31.64 
 
 
225 aa  81.6  0.00000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  30.85 
 
 
220 aa  80.9  0.00000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.77 
 
 
242 aa  80.9  0.00000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  31.64 
 
 
225 aa  81.3  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  33.15 
 
 
220 aa  80.1  0.00000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  28.79 
 
 
226 aa  79.3  0.00000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  31.07 
 
 
228 aa  79  0.00000000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  29.73 
 
 
223 aa  79  0.00000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  29.38 
 
 
225 aa  78.6  0.00000000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  28.02 
 
 
229 aa  78.2  0.0000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  29.06 
 
 
230 aa  78.6  0.0000000000001  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  31.68 
 
 
252 aa  78.2  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  30.57 
 
 
225 aa  78.2  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_014248  Aazo_3421  Crp/Fnr family transcriptional regulator  27.06 
 
 
232 aa  78.2  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.03 
 
 
226 aa  77.4  0.0000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  29.95 
 
 
222 aa  77.4  0.0000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  26.74 
 
 
228 aa  77.4  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  31.87 
 
 
225 aa  77.8  0.0000000000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  26.73 
 
 
239 aa  77.4  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  28.83 
 
 
246 aa  77  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  26.75 
 
 
225 aa  77  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  31.46 
 
 
228 aa  76.6  0.0000000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  29.28 
 
 
263 aa  76.6  0.0000000000004  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  27.59 
 
 
236 aa  76.6  0.0000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  27.23 
 
 
240 aa  76.6  0.0000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  26.55 
 
 
224 aa  75.9  0.0000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  30.77 
 
 
227 aa  75.9  0.0000000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_2417  cyclic nucleotide-binding protein  24.58 
 
 
250 aa  75.5  0.0000000000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.034588  normal  0.0382931 
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  28.31 
 
 
231 aa  75.5  0.0000000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  23 
 
 
232 aa  75.5  0.0000000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  30.29 
 
 
223 aa  75.9  0.0000000000007  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  28.7 
 
 
229 aa  75.5  0.0000000000008  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0066  transcriptional regulator, Crp/Fnr family  31.36 
 
 
220 aa  75.1  0.0000000000009  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.94 
 
 
228 aa  75.5  0.0000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  28.11 
 
 
226 aa  75.1  0.0000000000009  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  27.33 
 
 
234 aa  74.7  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  29.55 
 
 
236 aa  75.1  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  25.94 
 
 
234 aa  74.7  0.000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  31.07 
 
 
224 aa  74.7  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  28.5 
 
 
229 aa  75.1  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  29.41 
 
 
228 aa  74.7  0.000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  29.19 
 
 
223 aa  74.3  0.000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  28.82 
 
 
214 aa  73.9  0.000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  29.6 
 
 
235 aa  74.3  0.000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  30.68 
 
 
226 aa  74.3  0.000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  25.61 
 
 
352 aa  74.3  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_007925  RPC_4494  Crp/FNR family transcriptional regulator  30.29 
 
 
232 aa  73.9  0.000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.164578 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  29.83 
 
 
223 aa  74.7  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.55 
 
 
226 aa  74.3  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  28.37 
 
 
225 aa  73.6  0.000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_007413  Ava_3066  Crp/FNR family transcriptional regulator  26.2 
 
 
232 aa  73.9  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  27.6 
 
 
225 aa  73.6  0.000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  27.47 
 
 
235 aa  73.6  0.000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  30.29 
 
 
223 aa  73.9  0.000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  30.14 
 
 
225 aa  73.6  0.000000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  31.79 
 
 
234 aa  73.6  0.000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  27.35 
 
 
231 aa  73.2  0.000000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  27.35 
 
 
231 aa  73.2  0.000000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  30.52 
 
 
222 aa  73.2  0.000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_007964  Nham_2812  Crp/FNR family transcriptional regulator  25.85 
 
 
243 aa  73.2  0.000000000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  31.17 
 
 
221 aa  73.2  0.000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  25 
 
 
230 aa  72.8  0.000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  29.71 
 
 
225 aa  72.8  0.000000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  31.17 
 
 
225 aa  72.4  0.000000000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  31.17 
 
 
225 aa  72.4  0.000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1992  Crp/FNR family transcriptional regulator  28.57 
 
 
226 aa  72  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.103472  n/a   
 
 
-
 
NC_011138  MADE_01198  cyclic nucleotide-binding protein  31.48 
 
 
229 aa  71.6  0.00000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  24.22 
 
 
230 aa  71.6  0.00000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.73 
 
 
243 aa  71.6  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_013131  Caci_2591  transcriptional regulator, Crp/Fnr family  30.06 
 
 
221 aa  72  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.44001  normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  29.78 
 
 
224 aa  71.6  0.00000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_011884  Cyan7425_1533  transcriptional regulator, Crp/Fnr family  29.34 
 
 
231 aa  71.2  0.00000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  26.76 
 
 
224 aa  71.6  0.00000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  28.21 
 
 
237 aa  70.5  0.00000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  28.92 
 
 
222 aa  70.9  0.00000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  26.76 
 
 
224 aa  71.2  0.00000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  26.76 
 
 
224 aa  71.2  0.00000000002  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  29.22 
 
 
231 aa  71.2  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  26.76 
 
 
224 aa  71.2  0.00000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  24.68 
 
 
230 aa  70.1  0.00000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  24.68 
 
 
230 aa  70.1  0.00000000003  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
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