More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_6158 on replicon NC_010510
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  100 
 
 
251 aa  501  1e-141  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1475  Crp/FNR family transcriptional regulator  58.22 
 
 
260 aa  253  3e-66  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.796858 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  56.74 
 
 
260 aa  250  2e-65  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2083  CRP/FNR family transcriptional regulator  54.67 
 
 
258 aa  238  8e-62  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.193038 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  52.97 
 
 
256 aa  235  5.0000000000000005e-61  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  48.2 
 
 
254 aa  210  2e-53  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  48.03 
 
 
281 aa  209  3e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  48.2 
 
 
254 aa  209  5e-53  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  46.85 
 
 
254 aa  202  4e-51  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_007406  Nwi_0675  cyclic nucleotide-binding protein  43.35 
 
 
240 aa  186  3e-46  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.35129  normal  0.370797 
 
 
-
 
NC_007778  RPB_1486  Crp/FNR family transcriptional regulator  37.02 
 
 
240 aa  116  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1779  Crp/FNR family transcriptional regulator  30.14 
 
 
239 aa  91.7  1e-17  Acidovorax sp. JS42  Bacteria  normal  0.72161  normal 
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  27.55 
 
 
232 aa  90.9  2e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_011992  Dtpsy_1943  transcriptional regulator, Crp/Fnr family  29.67 
 
 
239 aa  89.7  4e-17  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  28.65 
 
 
239 aa  87.8  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_007908  Rfer_3326  Crp/FNR family transcriptional regulator  28.23 
 
 
239 aa  85.1  0.000000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2630  transcriptional regulator, Crp/Fnr family  28.57 
 
 
239 aa  84  0.000000000000002  Variovorax paradoxus S110  Bacteria  decreased coverage  0.00642792  n/a   
 
 
-
 
NC_007948  Bpro_2959  Crp/FNR family transcriptional regulator  28.23 
 
 
241 aa  83.2  0.000000000000004  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3075  Crp/FNR family transcriptional regulator  27.75 
 
 
239 aa  82.4  0.000000000000007  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.193734 
 
 
-
 
NC_008781  Pnap_1913  CRP/FNR family transcriptional regulator  30.1 
 
 
241 aa  80.9  0.00000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.205993  normal  0.953786 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  30.54 
 
 
224 aa  79.7  0.00000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_010002  Daci_3287  Crp/FNR family transcriptional regulator  27.31 
 
 
239 aa  79  0.00000000000006  Delftia acidovorans SPH-1  Bacteria  normal  0.370075  normal  0.683237 
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  26.74 
 
 
227 aa  78.2  0.0000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.23 
 
 
231 aa  77.4  0.0000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_011992  Dtpsy_0976  transcriptional regulator, Crp/Fnr family  28.43 
 
 
258 aa  77  0.0000000000003  Acidovorax ebreus TPSY  Bacteria  normal  0.859751  n/a   
 
 
-
 
NC_009767  Rcas_0252  Crp/FNR family transcriptional regulator  30.46 
 
 
218 aa  77  0.0000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  unclonable  0.00000185636  normal  0.131428 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.37 
 
 
236 aa  77  0.0000000000003  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_008782  Ajs_1058  CRP/FNR family transcriptional regulator  28.43 
 
 
258 aa  77  0.0000000000003  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  28.57 
 
 
235 aa  76.3  0.0000000000005  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_008009  Acid345_0362  Crp/FNR family transcriptional regulator  26.83 
 
 
234 aa  75.1  0.0000000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.74387  normal  0.571703 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  27.82 
 
 
246 aa  75.1  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  26.03 
 
 
227 aa  74.7  0.000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  26.4 
 
 
232 aa  74.7  0.000000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  23.04 
 
 
236 aa  74.7  0.000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  25.87 
 
 
236 aa  75.1  0.000000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  23.04 
 
 
236 aa  74.7  0.000000000001  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  28.27 
 
 
222 aa  73.9  0.000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  27.84 
 
 
229 aa  73.6  0.000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013456  VEA_003082  transcriptional regulator Crp/Fnr family  28.87 
 
 
231 aa  73.6  0.000000000003  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00863529  n/a   
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  27.08 
 
 
263 aa  72.4  0.000000000006  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  26.6 
 
 
237 aa  72  0.000000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  28.8 
 
 
228 aa  72  0.000000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  24.06 
 
 
243 aa  71.6  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  22.12 
 
 
225 aa  71.2  0.00000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  28.3 
 
 
254 aa  71.2  0.00000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  26.04 
 
 
212 aa  71.2  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  26.82 
 
 
229 aa  71.2  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  23.86 
 
 
247 aa  70.5  0.00000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  31.41 
 
 
242 aa  70.5  0.00000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008786  Veis_4308  cyclic nucleotide-binding protein  24.88 
 
 
239 aa  71.2  0.00000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0411784  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  27.98 
 
 
227 aa  70.9  0.00000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  25.23 
 
 
231 aa  70.5  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_011830  Dhaf_3071  transcriptional regulator, Crp/Fnr family  26.02 
 
 
224 aa  69.7  0.00000000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00222127  n/a   
 
 
-
 
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  26.23 
 
 
220 aa  69.3  0.00000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3468  CRP/FNR family transcriptional regulator  27.84 
 
 
236 aa  68.9  0.00000000007  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  28.57 
 
 
235 aa  68.9  0.00000000008  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  24.49 
 
 
248 aa  67.8  0.0000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_013739  Cwoe_0602  transcriptional regulator, Crp/Fnr family  25.24 
 
 
225 aa  67.4  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.628877 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  24.79 
 
 
227 aa  67.8  0.0000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  28.57 
 
 
225 aa  67.4  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_008699  Noca_1619  cyclic nucleotide-binding  26.91 
 
 
235 aa  67.4  0.0000000002  Nocardioides sp. JS614  Bacteria  normal  0.146026  n/a   
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  23.9 
 
 
227 aa  67.4  0.0000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  23.5 
 
 
243 aa  67  0.0000000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  22.9 
 
 
236 aa  67  0.0000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_008786  Veis_2946  CRP/FNR family transcriptional regulator  27.75 
 
 
214 aa  66.6  0.0000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.69422  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  24.73 
 
 
234 aa  66.2  0.0000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  28.12 
 
 
225 aa  66.2  0.0000000005  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  22.97 
 
 
225 aa  65.9  0.0000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  24.02 
 
 
223 aa  65.9  0.0000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4994  cyclic nucleotide-binding protein  26.83 
 
 
247 aa  65.9  0.0000000007  Delftia acidovorans SPH-1  Bacteria  normal  0.103725  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  24.15 
 
 
226 aa  65.5  0.0000000008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0303  transcriptional regulator, Crp/Fnr family  25.95 
 
 
228 aa  65.5  0.0000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  23.71 
 
 
241 aa  64.7  0.000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  25.13 
 
 
222 aa  65.1  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  26.89 
 
 
229 aa  65.1  0.000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  29.21 
 
 
202 aa  64.7  0.000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  20.79 
 
 
227 aa  65.1  0.000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  25.81 
 
 
224 aa  64.7  0.000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  23.96 
 
 
219 aa  65.1  0.000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.6 
 
 
225 aa  64.3  0.000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  24.09 
 
 
225 aa  64.3  0.000000002  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02063  transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) protein  25.13 
 
 
222 aa  63.9  0.000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00714534  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  24.87 
 
 
229 aa  64.3  0.000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  26.03 
 
 
224 aa  63.2  0.000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  22.77 
 
 
220 aa  63.5  0.000000003  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  23.35 
 
 
229 aa  63.5  0.000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  24.52 
 
 
214 aa  63.2  0.000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  26.2 
 
 
228 aa  63.2  0.000000004  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  27.08 
 
 
224 aa  63.2  0.000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  24.3 
 
 
239 aa  62.8  0.000000005  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  24.89 
 
 
243 aa  62.8  0.000000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  22.28 
 
 
226 aa  62.4  0.000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_008261  CPF_1250  Crp/FNR family transcriptional regulator  22.16 
 
 
236 aa  62.4  0.000000007  Clostridium perfringens ATCC 13124  Bacteria  normal  0.403908  n/a   
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  27.27 
 
 
251 aa  62  0.000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_007974  Rmet_4243  Crp/Fnr family transcriptional regulator  25.71 
 
 
305 aa  62  0.000000008  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.286118 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  27.46 
 
 
240 aa  62  0.000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  24.49 
 
 
222 aa  62  0.000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008825  Mpe_A1951  Crp/FNR family transcriptional regulator  26.36 
 
 
234 aa  62  0.000000008  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.1084 
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  27.46 
 
 
240 aa  62  0.000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  30.29 
 
 
238 aa  62  0.000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
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