More than 300 homologs were found in PanDaTox collection
for query gene Rleg_2360 on replicon NC_012850
Organism: Rhizobium leguminosarum bv. trifolii WSM1325



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  100 
 
 
240 aa  486  1e-137  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  92.5 
 
 
240 aa  453  1.0000000000000001e-126  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  64.96 
 
 
241 aa  321  7e-87  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  60.73 
 
 
242 aa  271  8.000000000000001e-72  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_007406  Nwi_2061  Crp family transcriptional regulator  48.31 
 
 
241 aa  229  4e-59  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.00300081  normal 
 
 
-
 
NC_007964  Nham_1258  Crp/FNR family transcriptional regulator  47.03 
 
 
241 aa  221  9.999999999999999e-57  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  42.54 
 
 
230 aa  192  3e-48  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_007802  Jann_3858  Crp/FNR family transcriptional regulator  43.24 
 
 
248 aa  185  6e-46  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  40.83 
 
 
231 aa  177  2e-43  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  41.44 
 
 
246 aa  177  2e-43  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  42.22 
 
 
248 aa  176  4e-43  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  42.22 
 
 
248 aa  176  4e-43  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  42.73 
 
 
242 aa  172  2.9999999999999996e-42  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  41.78 
 
 
248 aa  172  3.9999999999999995e-42  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  38.67 
 
 
249 aa  168  8e-41  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  40.19 
 
 
310 aa  143  3e-33  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_1850  CRP/FNR family transcriptional regulator  38.3 
 
 
211 aa  141  7e-33  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  38.05 
 
 
237 aa  140  1.9999999999999998e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  35.4 
 
 
250 aa  134  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  34.96 
 
 
250 aa  132  3.9999999999999996e-30  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  35.14 
 
 
254 aa  131  7.999999999999999e-30  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  35.78 
 
 
245 aa  128  9.000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  38.18 
 
 
246 aa  126  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  35.56 
 
 
250 aa  127  2.0000000000000002e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  33.33 
 
 
249 aa  123  2e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  35.51 
 
 
253 aa  123  3e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  33.65 
 
 
239 aa  121  9e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  33.18 
 
 
239 aa  121  9.999999999999999e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  33.18 
 
 
239 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  37.5 
 
 
222 aa  120  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  33.01 
 
 
248 aa  119  3e-26  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  34.8 
 
 
238 aa  119  3e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  34.8 
 
 
238 aa  119  3e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2572  crpK, Fnr-type transcriptional regulator  30.67 
 
 
263 aa  116  3e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1230  CRP/FNR family transcriptional regulator  30.67 
 
 
263 aa  116  3e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  32.52 
 
 
251 aa  116  3.9999999999999997e-25  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  34.55 
 
 
242 aa  115  5e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_009428  Rsph17025_1951  CRP/FNR family transcriptional regulator  31.28 
 
 
263 aa  114  1.0000000000000001e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  31.8 
 
 
262 aa  114  1.0000000000000001e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  32.23 
 
 
239 aa  112  4.0000000000000004e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_010338  Caul_2457  Crp/FNR family transcriptional regulator  36.32 
 
 
204 aa  110  2.0000000000000002e-23  Caulobacter sp. K31  Bacteria  normal  0.325923  normal  0.600278 
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  34.09 
 
 
229 aa  108  8.000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  34.09 
 
 
229 aa  108  1e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_009720  Xaut_1746  CRP/FNR family transcriptional regulator  34.92 
 
 
236 aa  105  9e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  0.753218  normal  0.546792 
 
 
-
 
NC_010505  Mrad2831_0408  Crp/FNR family transcriptional regulator  35.76 
 
 
230 aa  104  1e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  34.34 
 
 
230 aa  103  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_008786  Veis_1163  CRP/FNR family transcriptional regulator  30.87 
 
 
251 aa  102  7e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2279  Crp/FNR family transcriptional regulator  30.84 
 
 
258 aa  101  1e-20  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  30.21 
 
 
239 aa  100  2e-20  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  32.57 
 
 
250 aa  100  3e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_007948  Bpro_1170  Crp/FNR family transcriptional regulator  29.59 
 
 
274 aa  99.8  3e-20  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  32.43 
 
 
231 aa  100  3e-20  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.11 
 
 
236 aa  100  3e-20  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.11 
 
 
236 aa  99.4  4e-20  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_010338  Caul_2975  Crp/FNR family transcriptional regulator  35.6 
 
 
220 aa  99.4  5e-20  Caulobacter sp. K31  Bacteria  normal  0.169439  normal  0.307783 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  33.91 
 
 
231 aa  99  6e-20  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  27.65 
 
 
236 aa  99  6e-20  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  27.83 
 
 
254 aa  99  7e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  34.04 
 
 
235 aa  98.6  7e-20  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_010338  Caul_0629  transcriptional regulator FixK  31.35 
 
 
215 aa  98.2  9e-20  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  34.22 
 
 
226 aa  98.6  9e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1091  CRP/FNR family transcriptional regulator  27.51 
 
 
247 aa  98.2  1e-19  Acidovorax sp. JS42  Bacteria  normal  0.140321  normal 
 
 
-
 
NC_011992  Dtpsy_1007  transcriptional regulator, Crp/Fnr family  27.51 
 
 
242 aa  98.2  1e-19  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  27.19 
 
 
236 aa  97.8  1e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_011894  Mnod_4871  transcriptional regulator, Crp/Fnr family  35.06 
 
 
228 aa  97.8  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  31.63 
 
 
244 aa  97.4  2e-19  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009467  Acry_3214  CRP/FNR family transcriptional regulator  33.33 
 
 
230 aa  97.4  2e-19  Acidiphilium cryptum JF-5  Bacteria  normal  0.939046  n/a   
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  34.34 
 
 
229 aa  97.4  2e-19  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_008789  Hhal_0917  CRP/FNR family transcriptional regulator  31.11 
 
 
254 aa  97.4  2e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02295  fumarate/nitrate reduction transcriptional regulator  26.5 
 
 
248 aa  96.7  3e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  27.83 
 
 
250 aa  96.7  3e-19  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  27.83 
 
 
250 aa  96.7  3e-19  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  27.83 
 
 
250 aa  96.7  3e-19  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_011312  VSAL_I1571  fumarate/nitrate reduction transcriptional regulator  26.5 
 
 
250 aa  96.3  4e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.75505  n/a   
 
 
-
 
NC_008781  Pnap_3775  CRP/FNR family transcriptional regulator  28.07 
 
 
265 aa  95.5  6e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  27.19 
 
 
250 aa  95.9  6e-19  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  27.19 
 
 
250 aa  95.9  6e-19  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  27.19 
 
 
250 aa  95.9  6e-19  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  27.19 
 
 
250 aa  95.9  6e-19  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  27.19 
 
 
250 aa  95.9  6e-19  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003475  fumarate and nitrate reduction regulatory protein  26.07 
 
 
248 aa  95.1  1e-18  Vibrio sp. Ex25  Bacteria  normal  0.292896  n/a   
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  31.35 
 
 
229 aa  94.7  1e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_007908  Rfer_1937  Crp/FNR family transcriptional regulator  30.46 
 
 
223 aa  94.7  1e-18  Rhodoferax ferrireducens T118  Bacteria  normal  0.155753  n/a   
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  28.45 
 
 
250 aa  94.4  1e-18  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  26.07 
 
 
250 aa  94  2e-18  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  25.99 
 
 
253 aa  94  2e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  27.39 
 
 
250 aa  94.4  2e-18  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_010002  Daci_2782  Crp/FNR family transcriptional regulator  27.51 
 
 
262 aa  94  2e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.0680307  normal  0.414614 
 
 
-
 
NC_008752  Aave_1530  Crp/FNR family transcriptional regulator  27.51 
 
 
239 aa  94.4  2e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  30.29 
 
 
243 aa  93.6  3e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2772  Crp/FNR family transcriptional regulator  27.63 
 
 
245 aa  93.6  3e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00275745 
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  27.16 
 
 
249 aa  93.2  3e-18  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_010511  M446_6107  Crp/FNR family transcriptional regulator  33.73 
 
 
227 aa  92.8  4e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0266042 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  31.35 
 
 
229 aa  92.8  4e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1843  fumarate/nitrate reduction transcriptional regulator  27.12 
 
 
250 aa  92.8  4e-18  Shewanella denitrificans OS217  Bacteria  normal  0.0177159  n/a   
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  29.23 
 
 
256 aa  93.2  4e-18  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  33.73 
 
 
227 aa  92  7e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  28.21 
 
 
256 aa  92  8e-18  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
NC_009429  Rsph17025_3610  hypothetical protein  32.09 
 
 
231 aa  91.3  1e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  30.81 
 
 
229 aa  91.3  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
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