More than 300 homologs were found in PanDaTox collection
for query gene Xaut_2083 on replicon NC_009720
Organism: Xanthobacter autotrophicus Py2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_2083  CRP/FNR family transcriptional regulator  100 
 
 
258 aa  525  1e-148  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.193038 
 
 
-
 
NC_007778  RPB_1475  Crp/FNR family transcriptional regulator  65.85 
 
 
260 aa  311  6.999999999999999e-84  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.796858 
 
 
-
 
NC_010510  Mrad2831_6152  Crp/FNR family transcriptional regulator  65.53 
 
 
256 aa  308  5.9999999999999995e-83  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4199  cyclic nucleotide-binding protein  63.01 
 
 
260 aa  299  3e-80  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6158  cyclic nucleotide-binding protein  54.67 
 
 
251 aa  252  3e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4881  putative cyclic-AMP receptor-like protein  48.91 
 
 
281 aa  228  7e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal  0.139273 
 
 
-
 
NC_010172  Mext_3348  cyclic nucleotide-binding  48.32 
 
 
254 aa  221  7e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.181039  normal 
 
 
-
 
NC_011757  Mchl_3673  transcriptional regulator, Crp/Fnr family  47.9 
 
 
254 aa  221  9.999999999999999e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.43296  normal 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  48.32 
 
 
254 aa  220  1.9999999999999999e-56  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_007406  Nwi_0675  cyclic nucleotide-binding protein  46.12 
 
 
240 aa  206  4e-52  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.35129  normal  0.370797 
 
 
-
 
NC_007778  RPB_1486  Crp/FNR family transcriptional regulator  42.4 
 
 
240 aa  145  8.000000000000001e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  32.86 
 
 
234 aa  99.4  5e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_008786  Veis_2946  CRP/FNR family transcriptional regulator  29.95 
 
 
214 aa  97.4  2e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.69422  normal 
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  26.02 
 
 
239 aa  95.1  1e-18  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  26.11 
 
 
236 aa  94  2e-18  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  26.11 
 
 
236 aa  94  2e-18  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  29.11 
 
 
235 aa  93.6  3e-18  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  26.29 
 
 
229 aa  93.2  3e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013216  Dtox_1944  transcriptional regulator, Crp/Fnr family  27.62 
 
 
227 aa  92.8  5e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  25 
 
 
236 aa  92.8  5e-18  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  27.78 
 
 
247 aa  92  8e-18  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  30.04 
 
 
226 aa  90.9  2e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  24.53 
 
 
236 aa  90.1  3e-17  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  26.92 
 
 
248 aa  89.7  4e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  29.95 
 
 
224 aa  89.7  4e-17  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  25 
 
 
231 aa  89  7e-17  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  30.18 
 
 
228 aa  89  8e-17  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  29.08 
 
 
234 aa  89  8e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.19 
 
 
226 aa  89  8e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  28.85 
 
 
235 aa  88.2  1e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  24.17 
 
 
232 aa  87.8  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  24.06 
 
 
225 aa  87.8  2e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  30.89 
 
 
226 aa  86.7  3e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  28.04 
 
 
228 aa  86.7  4e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  30.32 
 
 
242 aa  86.3  4e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_013739  Cwoe_0602  transcriptional regulator, Crp/Fnr family  28.84 
 
 
225 aa  86.3  4e-16  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.628877 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  31.41 
 
 
225 aa  86.7  4e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  30.69 
 
 
220 aa  86.3  5e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_010815  Glov_3725  transcriptional regulator, Crp/Fnr family  25.84 
 
 
237 aa  85.9  6e-16  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0054318  normal  0.342144 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  27.83 
 
 
225 aa  85.5  7e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  23.85 
 
 
241 aa  85.1  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  26.7 
 
 
239 aa  84.7  0.000000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  23.85 
 
 
230 aa  84.3  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.28 
 
 
228 aa  84  0.000000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_008825  Mpe_A1951  Crp/FNR family transcriptional regulator  27.85 
 
 
234 aa  84.3  0.000000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.1084 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.36 
 
 
224 aa  83.2  0.000000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  26.61 
 
 
222 aa  82.8  0.000000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  25 
 
 
226 aa  82.8  0.000000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  26.8 
 
 
229 aa  82.4  0.000000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  24.67 
 
 
236 aa  82.4  0.000000000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  24.63 
 
 
234 aa  82.4  0.000000000000006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.42 
 
 
226 aa  82.4  0.000000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  29.41 
 
 
225 aa  82.4  0.000000000000006  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  28.18 
 
 
228 aa  82.4  0.000000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  28.71 
 
 
225 aa  82  0.000000000000008  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  21.76 
 
 
227 aa  82  0.000000000000008  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  27.37 
 
 
225 aa  81.6  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_010524  Lcho_4099  Crp/FNR family transcriptional regulator  29.95 
 
 
237 aa  81.6  0.00000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000000655046 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  29.79 
 
 
224 aa  81.3  0.00000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_013223  Dret_1643  transcriptional regulator, Crp/Fnr family  27.05 
 
 
227 aa  81.3  0.00000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3232  cyclic nucleotide-binding protein  27.6 
 
 
212 aa  81.3  0.00000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3212  CRP/FNR family transcriptional regulator  28.77 
 
 
229 aa  81.6  0.00000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0543887  normal 
 
 
-
 
NC_008782  Ajs_1779  Crp/FNR family transcriptional regulator  25.88 
 
 
239 aa  81.3  0.00000000000001  Acidovorax sp. JS42  Bacteria  normal  0.72161  normal 
 
 
-
 
NC_009441  Fjoh_4447  CRP/FNR family transcriptional regulator  25.91 
 
 
227 aa  80.5  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  26.17 
 
 
236 aa  80.5  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  23.61 
 
 
231 aa  80.9  0.00000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  27.81 
 
 
224 aa  81.3  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  27.37 
 
 
225 aa  80.9  0.00000000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  29.26 
 
 
224 aa  80.5  0.00000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  29.26 
 
 
224 aa  80.1  0.00000000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  29.26 
 
 
224 aa  80.5  0.00000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  29.32 
 
 
225 aa  80.5  0.00000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_010002  Daci_4994  cyclic nucleotide-binding protein  25.11 
 
 
247 aa  79.7  0.00000000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.103725  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  28.19 
 
 
225 aa  79.7  0.00000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  27.04 
 
 
222 aa  79.7  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_009523  RoseRS_0292  CRP/FNR family transcriptional regulator  28.1 
 
 
224 aa  79.7  0.00000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.210312  normal  0.0189188 
 
 
-
 
NC_012791  Vapar_2630  transcriptional regulator, Crp/Fnr family  26.32 
 
 
239 aa  79.3  0.00000000000005  Variovorax paradoxus S110  Bacteria  decreased coverage  0.00642792  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  28.92 
 
 
229 aa  79.3  0.00000000000005  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  28.72 
 
 
224 aa  79.3  0.00000000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  28.72 
 
 
224 aa  79.3  0.00000000000005  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_011830  Dhaf_0303  transcriptional regulator, Crp/Fnr family  26.11 
 
 
228 aa  79.3  0.00000000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  28.72 
 
 
224 aa  79.3  0.00000000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  24.54 
 
 
226 aa  79.3  0.00000000000006  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_008786  Veis_4308  cyclic nucleotide-binding protein  25 
 
 
239 aa  79.3  0.00000000000006  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0411784  normal 
 
 
-
 
NC_008752  Aave_3075  Crp/FNR family transcriptional regulator  25 
 
 
239 aa  79  0.00000000000007  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.193734 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  23.33 
 
 
231 aa  78.6  0.0000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  24.35 
 
 
229 aa  77.8  0.0000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  28.92 
 
 
210 aa  78.2  0.0000000000001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3326  Crp/FNR family transcriptional regulator  25.97 
 
 
239 aa  78.6  0.0000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1853  transcriptional regulator, Crp/Fnr family  25.67 
 
 
240 aa  78.6  0.0000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  23.15 
 
 
229 aa  77.8  0.0000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  26.94 
 
 
267 aa  78.2  0.0000000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  28.44 
 
 
225 aa  77.4  0.0000000000002  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  24.52 
 
 
223 aa  77.4  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1859  transcriptional regulator, Crp/Fnr family  26.88 
 
 
220 aa  77.4  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1943  transcriptional regulator, Crp/Fnr family  25 
 
 
239 aa  77.4  0.0000000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  24.29 
 
 
249 aa  77.4  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_009767  Rcas_3427  Crp/FNR family transcriptional regulator  29.95 
 
 
223 aa  77  0.0000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0598833  hitchhiker  0.00496827 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  26.47 
 
 
238 aa  77  0.0000000000003  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  23.83 
 
 
225 aa  77  0.0000000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
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