Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3287 |
Symbol | |
ID | 5748872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3602512 |
End bp | 3603231 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298391 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_001564310 |
Protein GI | 160898728 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.370075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.683237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACC CGATTCTTAC CATCGAAGAA CGTGAAGCGA TCAATTCCGG TCGCTGGTTT TCATCACTTT CTCCATCGCT TCGGCACGAC ATTCTTCGAT GCGCTTACGT CAAACGGTTC AAAGATGGCA CGCTCATCTG CGCACGCGGA GAACCGCCCG AGGAATGGAT CGCCTGCGCC CGCGGTGCGG TGCGCGTGAG CTCGACCTCG ATCACGGGCA AGCAGATCAC GCTGGACTAC GTGGAGCCGG GCATCTGGTT CGGCGACGTG GCCATCCTGG ACGGGGACAA GCGCACGCAC GATGCCTATG CGCACGGCGA GACCACGCTG CTGTGCGTGT CCAAGACCGA CTTCAAGAAA ATCCTGTCCA TGCATGTGGA GTTCTCGGAA GCCATGCTGC GCCTGCATGC ACGGCGCATC CGCCAGCTCT ACGGCCTGGT CGAGGACCTC AACACCCTGC CGCTGCGCGC GCGCCTGGCC AAGCAGCTGC TGCACCTGGT GCGCAGCTAC GGCGTGACCA GCCTGTCGGA TGGCAGCGAG ATCCGCATCG GCCTGCACCT GGCGCAGGAG GAACTGGCGC AGTTGCTGGG CGCCTCGCGC CAGCGCGTGA ACCAGGAACT CAAGGCCATG GAGCGCGAGA ACGCCATCCG CATCGAGCCG GGCGGCCTGG TGGTCTGCGA CCGCGACACG CTGCTGCGCA TCGCCGCGCC CGACGCCTGA
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Protein sequence | MDDPILTIEE REAINSGRWF SSLSPSLRHD ILRCAYVKRF KDGTLICARG EPPEEWIACA RGAVRVSSTS ITGKQITLDY VEPGIWFGDV AILDGDKRTH DAYAHGETTL LCVSKTDFKK ILSMHVEFSE AMLRLHARRI RQLYGLVEDL NTLPLRARLA KQLLHLVRSY GVTSLSDGSE IRIGLHLAQE ELAQLLGASR QRVNQELKAM ERENAIRIEP GGLVVCDRDT LLRIAAPDA
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