Gene RPB_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1486 
Symbol 
ID3908799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1675732 
End bp1676454 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637883381 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_485107 
Protein GI86748611 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGACCAA GCATTGCAAC CGAGGACATC GAGACGGTGG ATGCCGCGCG GAGCGATGCG 
GGGACGCATC GCTTTTTGCT GCAGGCGCTA CCGCCGCCCG ACCTCGACCT GGTGATGCGC
ACCGGCCGGA TCGTCTGGTT TCAGAACCGC GACTATCTGC TGCGGCAGGG CGAGCCGGGC
GACGGCATCC ACATCATCCT GAGCGGCGTT GTCGAAAGCA CCTATGTTGG TCAGCAACAG
CGCGAGCTGC TGCTGGCGAC CTGGCATCAA GGAGACTTCG TCGGTGCTCC GCATGTGCTC
GGTTATCATC TGCACAGCTG GTCGGCGCGG GCGCTGGGAC GGGTCGAGGC GCTGCATCTC
GACCAGCCGG CGATCCGCCG CCTGATCGCG CTGTCGCCGG CCTTCGCCGT TGCTCTGGTC
GGCTGTCTCG GCTTCAAGGG CGAGGCCTAT TCGGCGCTGG CGCAGACGCT GGGCGGCCAG
AAGGTCGGCG AGCGGCTGGC GCTGCTGCTG CTGAAGCTGT GCGAGGCCGC AGCTCAGGAC
GGCGACGGCC CAATTCCGCT CGGCCGCATC ACCCAGGCCA ATCTGGCGCG GATGATCGGC
GCCACGAGGC AGTCGATCAG CCTGGCGCTG ACCCGGCTGC AGGACGACGG CGTGATTTCG
GCGGGCGCCA CCACGCTGGT CGTCAACGAC CTCACCGCGC TGCGTCGGCA CGCCGGCGAG
TGA
 
Protein sequence
MGPSIATEDI ETVDAARSDA GTHRFLLQAL PPPDLDLVMR TGRIVWFQNR DYLLRQGEPG 
DGIHIILSGV VESTYVGQQQ RELLLATWHQ GDFVGAPHVL GYHLHSWSAR ALGRVEALHL
DQPAIRRLIA LSPAFAVALV GCLGFKGEAY SALAQTLGGQ KVGERLALLL LKLCEAAAQD
GDGPIPLGRI TQANLARMIG ATRQSISLAL TRLQDDGVIS AGATTLVVND LTALRRHAGE