Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1486 |
Symbol | |
ID | 3908799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1675732 |
End bp | 1676454 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637883381 |
Product | Crp/FNR family transcriptional regulator |
Protein accession | YP_485107 |
Protein GI | 86748611 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGACCAA GCATTGCAAC CGAGGACATC GAGACGGTGG ATGCCGCGCG GAGCGATGCG GGGACGCATC GCTTTTTGCT GCAGGCGCTA CCGCCGCCCG ACCTCGACCT GGTGATGCGC ACCGGCCGGA TCGTCTGGTT TCAGAACCGC GACTATCTGC TGCGGCAGGG CGAGCCGGGC GACGGCATCC ACATCATCCT GAGCGGCGTT GTCGAAAGCA CCTATGTTGG TCAGCAACAG CGCGAGCTGC TGCTGGCGAC CTGGCATCAA GGAGACTTCG TCGGTGCTCC GCATGTGCTC GGTTATCATC TGCACAGCTG GTCGGCGCGG GCGCTGGGAC GGGTCGAGGC GCTGCATCTC GACCAGCCGG CGATCCGCCG CCTGATCGCG CTGTCGCCGG CCTTCGCCGT TGCTCTGGTC GGCTGTCTCG GCTTCAAGGG CGAGGCCTAT TCGGCGCTGG CGCAGACGCT GGGCGGCCAG AAGGTCGGCG AGCGGCTGGC GCTGCTGCTG CTGAAGCTGT GCGAGGCCGC AGCTCAGGAC GGCGACGGCC CAATTCCGCT CGGCCGCATC ACCCAGGCCA ATCTGGCGCG GATGATCGGC GCCACGAGGC AGTCGATCAG CCTGGCGCTG ACCCGGCTGC AGGACGACGG CGTGATTTCG GCGGGCGCCA CCACGCTGGT CGTCAACGAC CTCACCGCGC TGCGTCGGCA CGCCGGCGAG TGA
|
Protein sequence | MGPSIATEDI ETVDAARSDA GTHRFLLQAL PPPDLDLVMR TGRIVWFQNR DYLLRQGEPG DGIHIILSGV VESTYVGQQQ RELLLATWHQ GDFVGAPHVL GYHLHSWSAR ALGRVEALHL DQPAIRRLIA LSPAFAVALV GCLGFKGEAY SALAQTLGGQ KVGERLALLL LKLCEAAAQD GDGPIPLGRI TQANLARMIG ATRQSISLAL TRLQDDGVIS AGATTLVVND LTALRRHAGE
|
| |