| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2630 |
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| Symbol | |
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| ID | 7972392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2775231 |
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| End bp | 2775950 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793218 |
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| Product | transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_002944521 |
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| Protein GI | 239815611 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00642792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACC CCATTCTTAC CATCGAAGAA CGTGAAGCGA TCAACAGTGG TCGCTGGTTT
TCTTCTCTTT CTCCATCGCT ACGGCACGAC ATCCTCCGAT GTGCTTTCGT CAAACGCTTC
AAGGACGGCG ACCTGATCGC TGCCCGCGGC GACCCTCCCG ACCACTGGAT CGCCTGCGCC
AAGGGCGCGG TGCGCGTCAG CTCGACGGCC GTCTCGGGCA AGCAGGTGAC GCTGACCTAC
GTGGAGCCGG GCATCTGGTT CGGCGACGTG GCGATGTTCG ACGGGGACCG GCGCACGCAC
GATGCCTATG CGCATGGGGA CACCACCATC CTGTGCGTGG CGCGGGCCGA CTTCCAGAAG
ATCCTGGCTG CGCACGTGGA GCTGTACGAA GCGCTGATGC GGCTGCAGGC GCGCCGCATC
CGCACGCTGT TCGGGCTGGT GGAAGACCTC AACACCCTGC CCCTGCGTGC ACGCCTGGCC
AAGCAGCTCA TCCACCTGGT GCGCAGCTAC GGCGTGCCCA ACCTGGAAGA CGGCAGCCAG
ATGCGCATCG GCCTGCAGCT GGCGCAGGAA GAACTCGCCC AGCTGCTCGG CGCCTCGCGC
CAGCGCGTCA ACCAGGAACT CAAGACCATG GAACGCGAGG GCACCATCCG CATCGAGCCG
GGCGGCCTGG TCGTATTGGA CCGCGCAGCA TTGATGCGCG TCTCGGAAGC AGATCATTGA
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| Protein sequence | MDDPILTIEE REAINSGRWF SSLSPSLRHD ILRCAFVKRF KDGDLIAARG DPPDHWIACA
KGAVRVSSTA VSGKQVTLTY VEPGIWFGDV AMFDGDRRTH DAYAHGDTTI LCVARADFQK
ILAAHVELYE ALMRLQARRI RTLFGLVEDL NTLPLRARLA KQLIHLVRSY GVPNLEDGSQ
MRIGLQLAQE ELAQLLGASR QRVNQELKTM EREGTIRIEP GGLVVLDRAA LMRVSEADH
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